Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Foxa1P35582 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC13.4□□□□□ -0.26
Foxa1P35582 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC13.4□□□□□ -0.26
Foxa1P35582 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Foxa1P35582 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Foxa1P35582 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Foxa1P35582 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Foxa1P35582 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Foxa1P35582 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Foxa1P35582 Gm37297-201ENSMUST00000192974 2384 ntBASIC13.4□□□□□ -0.26
Foxa1P35582 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Foxa1P35582 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Foxa1P35582 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Foxa1P35582 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Foxa1P35582 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Foxa1P35582 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Foxa1P35582 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Foxa1P35582 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Foxa1P35582 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Foxa1P35582 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Foxa1P35582 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Foxa1P35582 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC13.4□□□□□ -0.26
Foxa1P35582 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Foxa1P35582 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Foxa1P35582 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Foxa1P35582 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Foxa1P35582 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
Foxa1P35582 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Foxa1P35582 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC13.39□□□□□ -0.27
Foxa1P35582 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC13.39□□□□□ -0.27
Foxa1P35582 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Foxa1P35582 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Foxa1P35582 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Foxa1P35582 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Foxa1P35582 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Foxa1P35582 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Foxa1P35582 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Foxa1P35582 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Foxa1P35582 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Foxa1P35582 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Foxa1P35582 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC13.39□□□□□ -0.27
Foxa1P35582 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Foxa1P35582 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC13.39□□□□□ -0.27
Foxa1P35582 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC13.39□□□□□ -0.27
Foxa1P35582 AC158529.1-201ENSMUST00000223618 239 ntBASIC13.39□□□□□ -0.27
Foxa1P35582 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
Foxa1P35582 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Foxa1P35582 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Foxa1P35582 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Foxa1P35582 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Foxa1P35582 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Foxa1P35582 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Foxa1P35582 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC13.39□□□□□ -0.27
Foxa1P35582 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Foxa1P35582 Gm12620-201ENSMUST00000119791 1986 ntBASIC13.39□□□□□ -0.27
Foxa1P35582 Gm12612-201ENSMUST00000140182 1986 ntBASIC13.39□□□□□ -0.27
Foxa1P35582 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Foxa1P35582 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Foxa1P35582 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Foxa1P35582 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Foxa1P35582 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Foxa1P35582 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Foxa1P35582 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Foxa1P35582 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Foxa1P35582 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Foxa1P35582 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
Foxa1P35582 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Foxa1P35582 Gm44645-201ENSMUST00000205492 1653 ntBASIC13.38□□□□□ -0.27
Foxa1P35582 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Foxa1P35582 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC13.38□□□□□ -0.27
Foxa1P35582 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Foxa1P35582 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Foxa1P35582 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Foxa1P35582 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC13.38□□□□□ -0.27
Foxa1P35582 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Foxa1P35582 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC13.38□□□□□ -0.27
Foxa1P35582 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Foxa1P35582 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Foxa1P35582 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Foxa1P35582 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Foxa1P35582 Gm4081-201ENSMUST00000195287 1838 ntBASIC13.38□□□□□ -0.27
Foxa1P35582 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Foxa1P35582 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Foxa1P35582 Gm14451-201ENSMUST00000121581 1542 ntBASIC13.38□□□□□ -0.27
Foxa1P35582 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC13.38□□□□□ -0.27
Foxa1P35582 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Foxa1P35582 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Foxa1P35582 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC13.38□□□□□ -0.27
Foxa1P35582 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Foxa1P35582 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Foxa1P35582 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Foxa1P35582 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Foxa1P35582 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Foxa1P35582 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Foxa1P35582 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Foxa1P35582 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC13.37□□□□□ -0.27
Foxa1P35582 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Foxa1P35582 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC13.37□□□□□ -0.27
Foxa1P35582 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Foxa1P35582 Gm25287-201ENSMUST00000103846 110 ntBASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms