Protein–RNA interactions for Protein: P35276

Rab3d, Ras-related protein Rab-3D, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab3dP35276 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC12.13□□□□□ -0.47
Rab3dP35276 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC12.13□□□□□ -0.47
Rab3dP35276 AC164567.1-201ENSMUST00000219185 960 ntBASIC12.13□□□□□ -0.47
Rab3dP35276 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC12.13□□□□□ -0.47
Rab3dP35276 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rab3dP35276 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rab3dP35276 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rab3dP35276 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rab3dP35276 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rab3dP35276 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rab3dP35276 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rab3dP35276 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rab3dP35276 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Rab3dP35276 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Rab3dP35276 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rab3dP35276 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rab3dP35276 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rab3dP35276 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rab3dP35276 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC12.13□□□□□ -0.47
Rab3dP35276 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rab3dP35276 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rab3dP35276 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rab3dP35276 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rab3dP35276 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rab3dP35276 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rab3dP35276 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rab3dP35276 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Rab3dP35276 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Rab3dP35276 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC12.12□□□□□ -0.47
Rab3dP35276 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rab3dP35276 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC12.12□□□□□ -0.47
Rab3dP35276 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rab3dP35276 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rab3dP35276 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rab3dP35276 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rab3dP35276 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rab3dP35276 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rab3dP35276 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rab3dP35276 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Rab3dP35276 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rab3dP35276 Gm45003-201ENSMUST00000205875 2158 ntBASIC12.12□□□□□ -0.47
Rab3dP35276 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rab3dP35276 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rab3dP35276 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rab3dP35276 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rab3dP35276 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC12.11□□□□□ -0.47
Rab3dP35276 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rab3dP35276 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC12.11□□□□□ -0.47
Rab3dP35276 Gm30238-201ENSMUST00000195528 2603 ntBASIC12.11□□□□□ -0.47
Rab3dP35276 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Rab3dP35276 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rab3dP35276 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rab3dP35276 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rab3dP35276 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rab3dP35276 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rab3dP35276 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rab3dP35276 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rab3dP35276 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rab3dP35276 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rab3dP35276 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rab3dP35276 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rab3dP35276 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rab3dP35276 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rab3dP35276 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
Rab3dP35276 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rab3dP35276 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rab3dP35276 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
Rab3dP35276 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Rab3dP35276 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rab3dP35276 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rab3dP35276 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rab3dP35276 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rab3dP35276 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rab3dP35276 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rab3dP35276 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rab3dP35276 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Rab3dP35276 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rab3dP35276 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rab3dP35276 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Rab3dP35276 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rab3dP35276 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rab3dP35276 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rab3dP35276 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Rab3dP35276 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rab3dP35276 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rab3dP35276 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC12.1□□□□□ -0.47
Rab3dP35276 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.1□□□□□ -0.47
Rab3dP35276 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
Rab3dP35276 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rab3dP35276 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rab3dP35276 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Rab3dP35276 Kcnk16-202ENSMUST00000225596 2127 ntBASIC12.1□□□□□ -0.47
Rab3dP35276 Trav13-3-201ENSMUST00000117226 336 ntBASIC12.1□□□□□ -0.47
Rab3dP35276 Gm8097-201ENSMUST00000117903 829 ntBASIC12.1□□□□□ -0.47
Rab3dP35276 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Rab3dP35276 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rab3dP35276 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rab3dP35276 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Rab3dP35276 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rab3dP35276 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms