Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Slc6a1P31648 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC12.47□□□□□ -0.41
Slc6a1P31648 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Slc6a1P31648 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Slc6a1P31648 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Slc6a1P31648 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Slc6a1P31648 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Slc6a1P31648 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC12.47□□□□□ -0.41
Slc6a1P31648 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Slc6a1P31648 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Slc6a1P31648 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Slc6a1P31648 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC12.47□□□□□ -0.41
Slc6a1P31648 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC12.47□□□□□ -0.41
Slc6a1P31648 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Slc6a1P31648 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Slc6a1P31648 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Slc6a1P31648 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Slc6a1P31648 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC12.46□□□□□ -0.41
Slc6a1P31648 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC12.46□□□□□ -0.41
Slc6a1P31648 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Slc6a1P31648 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Slc6a1P31648 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Slc6a1P31648 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Slc6a1P31648 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Slc6a1P31648 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Slc6a1P31648 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Slc6a1P31648 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.41
Slc6a1P31648 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Slc6a1P31648 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Slc6a1P31648 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Slc6a1P31648 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Slc6a1P31648 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Slc6a1P31648 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Slc6a1P31648 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC12.46□□□□□ -0.41
Slc6a1P31648 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Slc6a1P31648 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Slc6a1P31648 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Slc6a1P31648 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC12.46□□□□□ -0.41
Slc6a1P31648 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC12.46□□□□□ -0.41
Slc6a1P31648 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC12.46□□□□□ -0.41
Slc6a1P31648 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC12.46□□□□□ -0.41
Slc6a1P31648 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC12.46□□□□□ -0.41
Slc6a1P31648 Mzt1-203ENSMUST00000227948 952 ntBASIC12.46□□□□□ -0.41
Slc6a1P31648 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Slc6a1P31648 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Slc6a1P31648 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Slc6a1P31648 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Slc6a1P31648 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Slc6a1P31648 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Slc6a1P31648 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.42
Slc6a1P31648 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Slc6a1P31648 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Slc6a1P31648 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Slc6a1P31648 Gm14451-201ENSMUST00000121581 1542 ntBASIC12.46□□□□□ -0.42
Slc6a1P31648 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Slc6a1P31648 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Slc6a1P31648 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Slc6a1P31648 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Slc6a1P31648 Gm10305-201ENSMUST00000195331 2475 ntBASIC12.46□□□□□ -0.42
Slc6a1P31648 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Slc6a1P31648 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Slc6a1P31648 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC12.46□□□□□ -0.42
Slc6a1P31648 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Slc6a1P31648 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Slc6a1P31648 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Slc6a1P31648 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Slc6a1P31648 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Slc6a1P31648 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Slc6a1P31648 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Slc6a1P31648 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Slc6a1P31648 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Slc6a1P31648 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Slc6a1P31648 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Slc6a1P31648 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC12.45□□□□□ -0.42
Slc6a1P31648 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Slc6a1P31648 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Slc6a1P31648 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Slc6a1P31648 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Slc6a1P31648 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Slc6a1P31648 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Slc6a1P31648 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Slc6a1P31648 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Slc6a1P31648 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Slc6a1P31648 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Slc6a1P31648 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Slc6a1P31648 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Slc6a1P31648 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Slc6a1P31648 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Slc6a1P31648 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Slc6a1P31648 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Slc6a1P31648 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Slc6a1P31648 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Slc6a1P31648 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Slc6a1P31648 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Slc6a1P31648 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Slc6a1P31648 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Slc6a1P31648 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Slc6a1P31648 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC12.44□□□□□ -0.42
Slc6a1P31648 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.44□□□□□ -0.42
Slc6a1P31648 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms