Protein–RNA interactions for Protein: P23198

Cbx3, Chromobox protein homolog 3, mousemouse

Known RBP Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx3P23198 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cbx3P23198 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Cbx3P23198 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cbx3P23198 Gm22697-201ENSMUST00000175194 63 ntBASIC13.22□□□□□ -0.29
Cbx3P23198 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Cbx3P23198 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC13.22□□□□□ -0.29
Cbx3P23198 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cbx3P23198 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Cbx3P23198 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cbx3P23198 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
Cbx3P23198 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cbx3P23198 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cbx3P23198 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC13.22□□□□□ -0.29
Cbx3P23198 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cbx3P23198 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Cbx3P23198 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cbx3P23198 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cbx3P23198 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cbx3P23198 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cbx3P23198 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cbx3P23198 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC13.22□□□□□ -0.29
Cbx3P23198 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cbx3P23198 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cbx3P23198 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cbx3P23198 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cbx3P23198 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cbx3P23198 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cbx3P23198 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cbx3P23198 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cbx3P23198 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cbx3P23198 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cbx3P23198 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cbx3P23198 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cbx3P23198 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cbx3P23198 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cbx3P23198 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cbx3P23198 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cbx3P23198 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC13.21□□□□□ -0.29
Cbx3P23198 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC13.21□□□□□ -0.29
Cbx3P23198 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC13.21□□□□□ -0.29
Cbx3P23198 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC13.21□□□□□ -0.29
Cbx3P23198 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC13.21□□□□□ -0.29
Cbx3P23198 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cbx3P23198 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
Cbx3P23198 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cbx3P23198 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cbx3P23198 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cbx3P23198 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cbx3P23198 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cbx3P23198 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cbx3P23198 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC13.21□□□□□ -0.29
Cbx3P23198 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cbx3P23198 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cbx3P23198 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC13.21□□□□□ -0.29
Cbx3P23198 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cbx3P23198 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC13.21□□□□□ -0.3
Cbx3P23198 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cbx3P23198 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cbx3P23198 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC13.21□□□□□ -0.3
Cbx3P23198 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
Cbx3P23198 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cbx3P23198 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.3
Cbx3P23198 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cbx3P23198 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cbx3P23198 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC13.21□□□□□ -0.3
Cbx3P23198 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
Cbx3P23198 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Cbx3P23198 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Cbx3P23198 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cbx3P23198 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cbx3P23198 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cbx3P23198 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cbx3P23198 Gm15442-201ENSMUST00000117905 1527 ntBASIC13.2□□□□□ -0.3
Cbx3P23198 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cbx3P23198 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cbx3P23198 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC13.2□□□□□ -0.3
Cbx3P23198 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cbx3P23198 Gm6433-201ENSMUST00000118634 875 ntBASIC13.2□□□□□ -0.3
Cbx3P23198 Gm11355-201ENSMUST00000121120 306 ntBASIC13.2□□□□□ -0.3
Cbx3P23198 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Cbx3P23198 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Cbx3P23198 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cbx3P23198 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cbx3P23198 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cbx3P23198 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Cbx3P23198 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Cbx3P23198 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC13.2□□□□□ -0.3
Cbx3P23198 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cbx3P23198 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Cbx3P23198 Gm5639-201ENSMUST00000122305 2403 ntBASIC13.2□□□□□ -0.3
Cbx3P23198 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cbx3P23198 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cbx3P23198 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cbx3P23198 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Cbx3P23198 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cbx3P23198 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Cbx3P23198 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cbx3P23198 Gm7049-201ENSMUST00000223520 1712 ntBASIC13.19□□□□□ -0.3
Cbx3P23198 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cbx3P23198 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms