Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Clk1P22518 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clk1P22518 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Clk1P22518 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Clk1P22518 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clk1P22518 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clk1P22518 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clk1P22518 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clk1P22518 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clk1P22518 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clk1P22518 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Clk1P22518 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Clk1P22518 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clk1P22518 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clk1P22518 Gm37728-201ENSMUST00000195025 2292 ntBASIC13.52□□□□□ -0.25
Clk1P22518 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clk1P22518 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clk1P22518 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clk1P22518 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clk1P22518 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clk1P22518 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clk1P22518 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clk1P22518 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clk1P22518 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC13.51□□□□□ -0.25
Clk1P22518 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Clk1P22518 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Clk1P22518 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clk1P22518 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clk1P22518 Gm5357-201ENSMUST00000212720 1924 ntBASIC13.51□□□□□ -0.25
Clk1P22518 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clk1P22518 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clk1P22518 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Clk1P22518 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clk1P22518 Gm8096-201ENSMUST00000209921 1591 ntBASIC13.51□□□□□ -0.25
Clk1P22518 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clk1P22518 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Clk1P22518 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Clk1P22518 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC13.51□□□□□ -0.25
Clk1P22518 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC13.51□□□□□ -0.25
Clk1P22518 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC13.51□□□□□ -0.25
Clk1P22518 Gm43514-201ENSMUST00000198852 424 ntBASIC13.51□□□□□ -0.25
Clk1P22518 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clk1P22518 Thap2-203ENSMUST00000218989 527 ntBASIC13.51□□□□□ -0.25
Clk1P22518 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clk1P22518 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clk1P22518 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clk1P22518 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clk1P22518 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC13.51□□□□□ -0.25
Clk1P22518 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Clk1P22518 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Clk1P22518 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clk1P22518 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clk1P22518 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clk1P22518 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Clk1P22518 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clk1P22518 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clk1P22518 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Clk1P22518 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Clk1P22518 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clk1P22518 Gm38391-201ENSMUST00000191720 4069 ntBASIC13.5□□□□□ -0.25
Clk1P22518 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Clk1P22518 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Clk1P22518 Gm21009-201ENSMUST00000197169 1669 ntBASIC13.5□□□□□ -0.25
Clk1P22518 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clk1P22518 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
Clk1P22518 AC166491.1-201ENSMUST00000227053 2308 ntBASIC13.5□□□□□ -0.25
Clk1P22518 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC13.5□□□□□ -0.25
Clk1P22518 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clk1P22518 Gm29340-201ENSMUST00000188763 3854 ntBASIC13.5□□□□□ -0.25
Clk1P22518 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
Clk1P22518 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC13.5□□□□□ -0.25
Clk1P22518 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC13.5□□□□□ -0.25
Clk1P22518 Gm5177-201ENSMUST00000183092 997 ntBASIC13.5□□□□□ -0.25
Clk1P22518 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC13.5□□□□□ -0.25
Clk1P22518 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC13.5□□□□□ -0.25
Clk1P22518 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC13.5□□□□□ -0.25
Clk1P22518 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Clk1P22518 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clk1P22518 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Clk1P22518 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clk1P22518 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clk1P22518 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
Clk1P22518 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clk1P22518 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clk1P22518 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Clk1P22518 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Clk1P22518 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clk1P22518 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Clk1P22518 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clk1P22518 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clk1P22518 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clk1P22518 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Clk1P22518 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clk1P22518 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clk1P22518 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clk1P22518 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clk1P22518 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clk1P22518 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clk1P22518 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clk1P22518 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms