Protein–RNA interactions for Protein: P13438

Tpbpa, Trophoblast-specific protein alpha, mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TpbpaP13438 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC13.16□□□□□ -0.3
TpbpaP13438 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TpbpaP13438 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TpbpaP13438 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TpbpaP13438 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
TpbpaP13438 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
TpbpaP13438 Gm18856-201ENSMUST00000178096 1374 ntBASIC13.16□□□□□ -0.3
TpbpaP13438 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
TpbpaP13438 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TpbpaP13438 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TpbpaP13438 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
TpbpaP13438 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TpbpaP13438 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TpbpaP13438 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
TpbpaP13438 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC13.15□□□□□ -0.3
TpbpaP13438 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
TpbpaP13438 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC13.15□□□□□ -0.3
TpbpaP13438 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TpbpaP13438 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC13.15□□□□□ -0.3
TpbpaP13438 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TpbpaP13438 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
TpbpaP13438 Nupl1-207ENSMUST00000225311 2475 ntBASIC13.15□□□□□ -0.3
TpbpaP13438 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TpbpaP13438 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
TpbpaP13438 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TpbpaP13438 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TpbpaP13438 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
TpbpaP13438 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TpbpaP13438 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TpbpaP13438 Gm12008-201ENSMUST00000117791 755 ntBASIC13.15□□□□□ -0.3
TpbpaP13438 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TpbpaP13438 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC13.15□□□□□ -0.3
TpbpaP13438 Gm6089-201ENSMUST00000197666 938 ntBASIC13.15□□□□□ -0.3
TpbpaP13438 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TpbpaP13438 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
TpbpaP13438 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
TpbpaP13438 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TpbpaP13438 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TpbpaP13438 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC13.15□□□□□ -0.3
TpbpaP13438 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
TpbpaP13438 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
TpbpaP13438 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
TpbpaP13438 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
TpbpaP13438 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TpbpaP13438 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
TpbpaP13438 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
TpbpaP13438 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
TpbpaP13438 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC13.14□□□□□ -0.31
TpbpaP13438 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC13.14□□□□□ -0.31
TpbpaP13438 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TpbpaP13438 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TpbpaP13438 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TpbpaP13438 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC13.14□□□□□ -0.31
TpbpaP13438 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC13.14□□□□□ -0.31
TpbpaP13438 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC13.14□□□□□ -0.31
TpbpaP13438 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
TpbpaP13438 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
TpbpaP13438 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
TpbpaP13438 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TpbpaP13438 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
TpbpaP13438 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TpbpaP13438 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TpbpaP13438 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC13.14□□□□□ -0.31
TpbpaP13438 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TpbpaP13438 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TpbpaP13438 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
TpbpaP13438 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TpbpaP13438 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
TpbpaP13438 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
TpbpaP13438 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC13.13□□□□□ -0.31
TpbpaP13438 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
TpbpaP13438 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TpbpaP13438 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TpbpaP13438 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
TpbpaP13438 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
TpbpaP13438 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TpbpaP13438 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
TpbpaP13438 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
TpbpaP13438 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
TpbpaP13438 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
TpbpaP13438 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TpbpaP13438 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TpbpaP13438 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
TpbpaP13438 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
TpbpaP13438 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
TpbpaP13438 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TpbpaP13438 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
TpbpaP13438 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
TpbpaP13438 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
TpbpaP13438 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TpbpaP13438 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
TpbpaP13438 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TpbpaP13438 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
TpbpaP13438 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TpbpaP13438 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TpbpaP13438 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
TpbpaP13438 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TpbpaP13438 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TpbpaP13438 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TpbpaP13438 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms