Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Msx1P13297 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Msx1P13297 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Msx1P13297 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC13.76□□□□□ -0.21
Msx1P13297 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Msx1P13297 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Msx1P13297 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Msx1P13297 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Msx1P13297 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC13.76□□□□□ -0.21
Msx1P13297 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Msx1P13297 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Msx1P13297 AC124751.1-201ENSMUST00000222716 1408 ntBASIC13.76□□□□□ -0.21
Msx1P13297 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Msx1P13297 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC13.76□□□□□ -0.21
Msx1P13297 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC13.76□□□□□ -0.21
Msx1P13297 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Msx1P13297 Gm38294-201ENSMUST00000192831 381 ntBASIC13.76□□□□□ -0.21
Msx1P13297 Gm19331-201ENSMUST00000193799 1092 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Msx1P13297 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Msx1P13297 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC13.76□□□□□ -0.21
Msx1P13297 AC106830.1-201ENSMUST00000228032 1003 ntBASIC13.76□□□□□ -0.21
Msx1P13297 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Msx1P13297 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Msx1P13297 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Msx1P13297 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Msx1P13297 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Msx1P13297 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Msx1P13297 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Msx1P13297 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Msx1P13297 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Msx1P13297 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Msx1P13297 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Msx1P13297 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Msx1P13297 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Msx1P13297 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Msx1P13297 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC13.75□□□□□ -0.21
Msx1P13297 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Msx1P13297 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Msx1P13297 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC13.75□□□□□ -0.21
Msx1P13297 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Msx1P13297 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Msx1P13297 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Msx1P13297 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC13.75□□□□□ -0.21
Msx1P13297 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Msx1P13297 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Msx1P13297 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Msx1P13297 Gm11960-202ENSMUST00000181063 2858 ntBASIC13.75□□□□□ -0.21
Msx1P13297 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC13.75□□□□□ -0.21
Msx1P13297 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Msx1P13297 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Msx1P13297 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Msx1P13297 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Msx1P13297 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Msx1P13297 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Msx1P13297 Gm15593-201ENSMUST00000122085 1008 ntBASIC13.75□□□□□ -0.21
Msx1P13297 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC13.75□□□□□ -0.21
Msx1P13297 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Msx1P13297 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Msx1P13297 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Msx1P13297 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Msx1P13297 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Msx1P13297 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Msx1P13297 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Msx1P13297 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Msx1P13297 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Msx1P13297 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Msx1P13297 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Msx1P13297 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Msx1P13297 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Msx1P13297 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Msx1P13297 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Msx1P13297 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Msx1P13297 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Msx1P13297 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Msx1P13297 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Msx1P13297 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Msx1P13297 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Msx1P13297 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC13.75□□□□□ -0.21
Msx1P13297 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Msx1P13297 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Msx1P13297 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Msx1P13297 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Msx1P13297 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Msx1P13297 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Msx1P13297 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC13.74□□□□□ -0.21
Msx1P13297 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Msx1P13297 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Msx1P13297 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Msx1P13297 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Msx1P13297 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Msx1P13297 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Msx1P13297 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Msx1P13297 Gm16140-201ENSMUST00000117191 1060 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Msx1P13297 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC13.74□□□□□ -0.21
Msx1P13297 Gm22885-201ENSMUST00000157410 107 ntBASIC13.74□□□□□ -0.21
Msx1P13297 Gm38225-201ENSMUST00000194001 393 ntBASIC13.74□□□□□ -0.21
Msx1P13297 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Msx1P13297 Gm7653-201ENSMUST00000214567 508 ntBASIC13.74□□□□□ -0.21
Msx1P13297 Gm6888-201ENSMUST00000221983 706 ntBASIC13.74□□□□□ -0.21
Msx1P13297 AU017674-201ENSMUST00000222864 720 ntTSL 3 BASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms