Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Ccl1P10146 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccl1P10146 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccl1P10146 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Ccl1P10146 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccl1P10146 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Ccl1P10146 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC11.24□□□□□ -0.61
Ccl1P10146 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccl1P10146 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccl1P10146 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccl1P10146 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccl1P10146 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccl1P10146 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccl1P10146 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Ccl1P10146 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ccl1P10146 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccl1P10146 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccl1P10146 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccl1P10146 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccl1P10146 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccl1P10146 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccl1P10146 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ccl1P10146 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC11.23□□□□□ -0.61
Ccl1P10146 Gm22240-201ENSMUST00000175225 82 ntBASIC11.23□□□□□ -0.61
Ccl1P10146 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Ccl1P10146 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccl1P10146 Gm44454-201ENSMUST00000198541 138 ntBASIC11.23□□□□□ -0.61
Ccl1P10146 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Ccl1P10146 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccl1P10146 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccl1P10146 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ccl1P10146 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccl1P10146 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccl1P10146 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Ccl1P10146 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccl1P10146 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Ccl1P10146 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccl1P10146 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccl1P10146 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccl1P10146 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ccl1P10146 AC126250.1-201ENSMUST00000228343 1768 ntBASIC11.23□□□□□ -0.61
Ccl1P10146 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccl1P10146 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccl1P10146 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccl1P10146 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccl1P10146 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ccl1P10146 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccl1P10146 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccl1P10146 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccl1P10146 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccl1P10146 Gm12500-202ENSMUST00000186471 2428 ntBASIC11.23□□□□□ -0.61
Ccl1P10146 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC11.23□□□□□ -0.61
Ccl1P10146 AC121805.2-201ENSMUST00000218808 2538 ntBASIC11.23□□□□□ -0.61
Ccl1P10146 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ccl1P10146 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Ccl1P10146 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Ccl1P10146 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ccl1P10146 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ccl1P10146 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC11.22□□□□□ -0.61
Ccl1P10146 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Ccl1P10146 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ccl1P10146 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ccl1P10146 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC11.22□□□□□ -0.61
Ccl1P10146 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ccl1P10146 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC11.22□□□□□ -0.61
Ccl1P10146 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ccl1P10146 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Ccl1P10146 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ccl1P10146 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Ccl1P10146 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Ccl1P10146 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Ccl1P10146 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC11.22□□□□□ -0.61
Ccl1P10146 Gm45003-201ENSMUST00000205875 2158 ntBASIC11.22□□□□□ -0.61
Ccl1P10146 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Ccl1P10146 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC11.22□□□□□ -0.61
Ccl1P10146 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC11.22□□□□□ -0.61
Ccl1P10146 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ccl1P10146 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ccl1P10146 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ccl1P10146 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ccl1P10146 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ccl1P10146 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Ccl1P10146 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ccl1P10146 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ccl1P10146 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ccl1P10146 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC11.21□□□□□ -0.61
Ccl1P10146 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC11.21□□□□□ -0.61
Ccl1P10146 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Ccl1P10146 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Ccl1P10146 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Ccl1P10146 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Ccl1P10146 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ccl1P10146 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Ccl1P10146 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ccl1P10146 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Ccl1P10146 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ccl1P10146 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ccl1P10146 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ccl1P10146 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ccl1P10146 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms