Protein–RNA interactions for Protein: P0CW02

Ly6c1, Lymphocyte antigen 6C1, mousemouse

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ly6c1P0CW02 Gm7336-201ENSMUST00000107041 1232 ntBASIC12.13□□□□□ -0.47
Ly6c1P0CW02 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ly6c1P0CW02 Mir6956-201ENSMUST00000183598 62 ntBASIC12.13□□□□□ -0.47
Ly6c1P0CW02 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC12.13□□□□□ -0.47
Ly6c1P0CW02 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ly6c1P0CW02 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ly6c1P0CW02 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Ly6c1P0CW02 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ly6c1P0CW02 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ly6c1P0CW02 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC12.13□□□□□ -0.47
Ly6c1P0CW02 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ly6c1P0CW02 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ly6c1P0CW02 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Ly6c1P0CW02 Gm43598-201ENSMUST00000202482 2479 ntBASIC12.13□□□□□ -0.47
Ly6c1P0CW02 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ly6c1P0CW02 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Ly6c1P0CW02 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ly6c1P0CW02 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ly6c1P0CW02 Gm45133-201ENSMUST00000207548 2773 ntBASIC12.13□□□□□ -0.47
Ly6c1P0CW02 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ly6c1P0CW02 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ly6c1P0CW02 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ly6c1P0CW02 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ly6c1P0CW02 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ly6c1P0CW02 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ly6c1P0CW02 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Ly6c1P0CW02 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Ly6c1P0CW02 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ly6c1P0CW02 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ly6c1P0CW02 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ly6c1P0CW02 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC12.12□□□□□ -0.47
Ly6c1P0CW02 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ly6c1P0CW02 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ly6c1P0CW02 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Ly6c1P0CW02 Gm13823-201ENSMUST00000119930 345 ntBASIC12.12□□□□□ -0.47
Ly6c1P0CW02 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ly6c1P0CW02 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC12.12□□□□□ -0.47
Ly6c1P0CW02 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Ly6c1P0CW02 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC12.12□□□□□ -0.47
Ly6c1P0CW02 Gm28707-201ENSMUST00000186134 558 ntTSL 3 BASIC12.12□□□□□ -0.47
Ly6c1P0CW02 Gm37277-201ENSMUST00000194052 1111 ntBASIC12.12□□□□□ -0.47
Ly6c1P0CW02 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC12.12□□□□□ -0.47
Ly6c1P0CW02 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ly6c1P0CW02 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ly6c1P0CW02 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ly6c1P0CW02 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ly6c1P0CW02 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ly6c1P0CW02 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ly6c1P0CW02 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ly6c1P0CW02 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ly6c1P0CW02 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ly6c1P0CW02 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ly6c1P0CW02 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ly6c1P0CW02 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ly6c1P0CW02 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ly6c1P0CW02 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ly6c1P0CW02 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC12.11□□□□□ -0.47
Ly6c1P0CW02 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Ly6c1P0CW02 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ly6c1P0CW02 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ly6c1P0CW02 Meig1-202ENSMUST00000115081 421 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Ly6c1P0CW02 Ica1-202ENSMUST00000115518 1256 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ly6c1P0CW02 Gm12439-201ENSMUST00000117162 365 ntBASIC12.11□□□□□ -0.47
Ly6c1P0CW02 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC12.11□□□□□ -0.47
Ly6c1P0CW02 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
Ly6c1P0CW02 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ly6c1P0CW02 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ly6c1P0CW02 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Ly6c1P0CW02 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ly6c1P0CW02 Gm26952-201ENSMUST00000181996 409 ntTSL 3 BASIC12.11□□□□□ -0.47
Ly6c1P0CW02 Gm38294-201ENSMUST00000192831 381 ntBASIC12.11□□□□□ -0.47
Ly6c1P0CW02 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ly6c1P0CW02 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ly6c1P0CW02 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Ly6c1P0CW02 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC12.11□□□□□ -0.47
Ly6c1P0CW02 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ly6c1P0CW02 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC12.11□□□□□ -0.47
Ly6c1P0CW02 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ly6c1P0CW02 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ly6c1P0CW02 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Ly6c1P0CW02 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ly6c1P0CW02 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ly6c1P0CW02 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Ly6c1P0CW02 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ly6c1P0CW02 Gm9252-201ENSMUST00000172364 1602 ntBASIC12.11□□□□□ -0.47
Ly6c1P0CW02 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ly6c1P0CW02 Gm38058-201ENSMUST00000194323 4368 ntBASIC12.11□□□□□ -0.47
Ly6c1P0CW02 Gm45605-201ENSMUST00000210265 4269 ntBASIC12.11□□□□□ -0.47
Ly6c1P0CW02 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC12.1□□□□□ -0.47
Ly6c1P0CW02 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ly6c1P0CW02 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ly6c1P0CW02 Gm37736-201ENSMUST00000193564 2802 ntBASIC12.1□□□□□ -0.47
Ly6c1P0CW02 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Ly6c1P0CW02 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ly6c1P0CW02 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Ly6c1P0CW02 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ly6c1P0CW02 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ly6c1P0CW02 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ly6c1P0CW02 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC12.1□□□□□ -0.47
Ly6c1P0CW02 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms