Protein–RNA interactions for Protein: P09092

Hoxa6, Homeobox protein Hox-A6, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa6P09092 Gm27989-201ENSMUST00000184721 107 ntBASIC12.48□□□□□ -0.41
Hoxa6P09092 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxa6P09092 Gm2451-201ENSMUST00000199447 999 ntBASIC12.48□□□□□ -0.41
Hoxa6P09092 Gm10290-201ENSMUST00000200451 999 ntBASIC12.48□□□□□ -0.41
Hoxa6P09092 Olfr286-202ENSMUST00000205305 969 ntBASIC12.48□□□□□ -0.41
Hoxa6P09092 Gm6888-201ENSMUST00000221983 706 ntBASIC12.48□□□□□ -0.41
Hoxa6P09092 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxa6P09092 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxa6P09092 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Hoxa6P09092 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxa6P09092 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC12.48□□□□□ -0.41
Hoxa6P09092 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Hoxa6P09092 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxa6P09092 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Hoxa6P09092 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxa6P09092 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxa6P09092 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxa6P09092 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxa6P09092 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxa6P09092 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC12.47□□□□□ -0.41
Hoxa6P09092 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxa6P09092 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxa6P09092 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxa6P09092 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Hoxa6P09092 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxa6P09092 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxa6P09092 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Hoxa6P09092 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxa6P09092 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxa6P09092 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxa6P09092 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxa6P09092 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxa6P09092 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxa6P09092 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxa6P09092 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Hoxa6P09092 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxa6P09092 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxa6P09092 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC12.47□□□□□ -0.41
Hoxa6P09092 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Hoxa6P09092 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxa6P09092 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxa6P09092 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxa6P09092 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxa6P09092 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC12.47□□□□□ -0.41
Hoxa6P09092 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC12.47□□□□□ -0.41
Hoxa6P09092 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxa6P09092 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxa6P09092 Gm27321-201ENSMUST00000185021 205 ntBASIC12.47□□□□□ -0.41
Hoxa6P09092 Rbfox2-208ENSMUST00000227930 1218 ntBASIC12.47□□□□□ -0.41
Hoxa6P09092 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxa6P09092 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxa6P09092 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxa6P09092 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxa6P09092 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Hoxa6P09092 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
Hoxa6P09092 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Hoxa6P09092 Gm6756-201ENSMUST00000180647 1620 ntBASIC12.47□□□□□ -0.41
Hoxa6P09092 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxa6P09092 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxa6P09092 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxa6P09092 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxa6P09092 Gm43195-201ENSMUST00000200614 2332 ntBASIC12.46□□□□□ -0.41
Hoxa6P09092 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hoxa6P09092 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hoxa6P09092 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hoxa6P09092 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Hoxa6P09092 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Hoxa6P09092 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Hoxa6P09092 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Hoxa6P09092 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Hoxa6P09092 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Hoxa6P09092 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hoxa6P09092 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hoxa6P09092 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC12.46□□□□□ -0.41
Hoxa6P09092 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hoxa6P09092 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC12.46□□□□□ -0.41
Hoxa6P09092 Gm15653-201ENSMUST00000119247 907 ntBASIC12.46□□□□□ -0.41
Hoxa6P09092 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Hoxa6P09092 Mir6977-201ENSMUST00000184960 64 ntBASIC12.46□□□□□ -0.41
Hoxa6P09092 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC12.46□□□□□ -0.41
Hoxa6P09092 Gm9063-201ENSMUST00000223299 582 ntBASIC12.46□□□□□ -0.41
Hoxa6P09092 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hoxa6P09092 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hoxa6P09092 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Hoxa6P09092 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hoxa6P09092 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hoxa6P09092 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hoxa6P09092 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hoxa6P09092 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Hoxa6P09092 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Hoxa6P09092 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Hoxa6P09092 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hoxa6P09092 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hoxa6P09092 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Hoxa6P09092 Gm10676-201ENSMUST00000098778 3221 ntBASIC12.45□□□□□ -0.42
Hoxa6P09092 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hoxa6P09092 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hoxa6P09092 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hoxa6P09092 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hoxa6P09092 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms