Protein–RNA interactions for Protein: P09026

Hoxb3, Homeobox protein Hox-B3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb3P09026 Gm43598-201ENSMUST00000202482 2479 ntBASIC14.37□□□□□ -0.11
Hoxb3P09026 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
Hoxb3P09026 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxb3P09026 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxb3P09026 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Hoxb3P09026 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxb3P09026 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Hoxb3P09026 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Hoxb3P09026 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxb3P09026 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxb3P09026 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Hoxb3P09026 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxb3P09026 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxb3P09026 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC14.36□□□□□ -0.11
Hoxb3P09026 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxb3P09026 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxb3P09026 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Hoxb3P09026 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC14.36□□□□□ -0.11
Hoxb3P09026 Gm5566-201ENSMUST00000116118 459 ntBASIC14.36□□□□□ -0.11
Hoxb3P09026 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxb3P09026 Gm7584-201ENSMUST00000175829 940 ntBASIC14.36□□□□□ -0.11
Hoxb3P09026 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC14.36□□□□□ -0.11
Hoxb3P09026 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
Hoxb3P09026 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxb3P09026 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Hoxb3P09026 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxb3P09026 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
Hoxb3P09026 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxb3P09026 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxb3P09026 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxb3P09026 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Hoxb3P09026 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxb3P09026 Gm43289-201ENSMUST00000200537 1475 ntBASIC14.36□□□□□ -0.11
Hoxb3P09026 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxb3P09026 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxb3P09026 Asic1-205ENSMUST00000228185 1818 ntBASIC14.36□□□□□ -0.11
Hoxb3P09026 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxb3P09026 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxb3P09026 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxb3P09026 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxb3P09026 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxb3P09026 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxb3P09026 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxb3P09026 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxb3P09026 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxb3P09026 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxb3P09026 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxb3P09026 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxb3P09026 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxb3P09026 Gm9719-201ENSMUST00000162765 543 ntBASIC14.35□□□□□ -0.11
Hoxb3P09026 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxb3P09026 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Hoxb3P09026 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
Hoxb3P09026 Gm28745-201ENSMUST00000190069 305 ntBASIC14.35□□□□□ -0.11
Hoxb3P09026 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxb3P09026 Gm9826-201ENSMUST00000029124 1299 ntBASIC14.35□□□□□ -0.11
Hoxb3P09026 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxb3P09026 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Hoxb3P09026 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxb3P09026 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Hoxb3P09026 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxb3P09026 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxb3P09026 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxb3P09026 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxb3P09026 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC14.35□□□□□ -0.11
Hoxb3P09026 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxb3P09026 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC14.35□□□□□ -0.11
Hoxb3P09026 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxb3P09026 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxb3P09026 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxb3P09026 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Hoxb3P09026 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxb3P09026 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxb3P09026 Gm14780-201ENSMUST00000118387 2737 ntBASIC14.35□□□□□ -0.11
Hoxb3P09026 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxb3P09026 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxb3P09026 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxb3P09026 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxb3P09026 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxb3P09026 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxb3P09026 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
Hoxb3P09026 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxb3P09026 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxb3P09026 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxb3P09026 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxb3P09026 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxb3P09026 Gm10327-201ENSMUST00000105222 1002 ntBASIC14.34□□□□□ -0.11
Hoxb3P09026 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxb3P09026 Gm13350-201ENSMUST00000120519 479 ntBASIC14.34□□□□□ -0.11
Hoxb3P09026 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC14.34□□□□□ -0.11
Hoxb3P09026 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Hoxb3P09026 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxb3P09026 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC14.34□□□□□ -0.11
Hoxb3P09026 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxb3P09026 Gm18624-201ENSMUST00000220966 658 ntBASIC14.34□□□□□ -0.11
Hoxb3P09026 Shd-206ENSMUST00000225145 998 ntBASIC14.34□□□□□ -0.11
Hoxb3P09026 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxb3P09026 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxb3P09026 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxb3P09026 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms