Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col4a1P02463 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Col4a1P02463 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col4a1P02463 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Col4a1P02463 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col4a1P02463 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC17.51■□□□□ 0.39
Col4a1P02463 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col4a1P02463 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Col4a1P02463 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Col4a1P02463 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Col4a1P02463 Mir1982-201ENSMUST00000157368 74 ntBASIC17.51■□□□□ 0.39
Col4a1P02463 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col4a1P02463 Gm24196-201ENSMUST00000179161 110 ntBASIC17.51■□□□□ 0.39
Col4a1P02463 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col4a1P02463 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col4a1P02463 AC114543.1-201ENSMUST00000226451 1558 ntBASIC17.51■□□□□ 0.39
Col4a1P02463 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC17.51■□□□□ 0.39
Col4a1P02463 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC17.51■□□□□ 0.39
Col4a1P02463 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Col4a1P02463 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col4a1P02463 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Col4a1P02463 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col4a1P02463 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col4a1P02463 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col4a1P02463 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC17.5■□□□□ 0.39
Col4a1P02463 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col4a1P02463 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Col4a1P02463 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC17.5■□□□□ 0.39
Col4a1P02463 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col4a1P02463 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col4a1P02463 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col4a1P02463 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Col4a1P02463 Gm37015-201ENSMUST00000192763 1521 ntBASIC17.5■□□□□ 0.39
Col4a1P02463 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col4a1P02463 Gm10605-202ENSMUST00000183019 3198 ntBASIC17.5■□□□□ 0.39
Col4a1P02463 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col4a1P02463 Gm11557-201ENSMUST00000120200 1008 ntBASIC17.5■□□□□ 0.39
Col4a1P02463 Gm8927-201ENSMUST00000181978 981 ntBASIC17.5■□□□□ 0.39
Col4a1P02463 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC17.5■□□□□ 0.39
Col4a1P02463 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC17.5■□□□□ 0.39
Col4a1P02463 Gm3222-201ENSMUST00000071282 990 ntBASIC17.5■□□□□ 0.39
Col4a1P02463 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Col4a1P02463 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col4a1P02463 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col4a1P02463 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC17.5■□□□□ 0.39
Col4a1P02463 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC17.5■□□□□ 0.39
Col4a1P02463 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col4a1P02463 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col4a1P02463 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col4a1P02463 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col4a1P02463 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col4a1P02463 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col4a1P02463 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Col4a1P02463 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col4a1P02463 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Col4a1P02463 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col4a1P02463 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col4a1P02463 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
Col4a1P02463 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col4a1P02463 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC17.49■□□□□ 0.39
Col4a1P02463 AC140451.2-201ENSMUST00000228030 664 ntBASIC17.49■□□□□ 0.39
Col4a1P02463 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col4a1P02463 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC17.49■□□□□ 0.39
Col4a1P02463 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col4a1P02463 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Col4a1P02463 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col4a1P02463 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col4a1P02463 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
Col4a1P02463 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Col4a1P02463 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Col4a1P02463 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Col4a1P02463 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col4a1P02463 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col4a1P02463 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Col4a1P02463 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC17.48■□□□□ 0.39
Col4a1P02463 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col4a1P02463 Mir1938-201ENSMUST00000158746 100 ntBASIC17.48■□□□□ 0.39
Col4a1P02463 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col4a1P02463 Gm7287-201ENSMUST00000205267 602 ntBASIC17.48■□□□□ 0.39
Col4a1P02463 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC17.48■□□□□ 0.39
Col4a1P02463 Gm7561-201ENSMUST00000211203 886 ntBASIC17.48■□□□□ 0.39
Col4a1P02463 CT030704.2-201ENSMUST00000228887 494 ntBASIC17.48■□□□□ 0.39
Col4a1P02463 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col4a1P02463 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Col4a1P02463 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col4a1P02463 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Col4a1P02463 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col4a1P02463 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col4a1P02463 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col4a1P02463 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Col4a1P02463 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col4a1P02463 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col4a1P02463 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col4a1P02463 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC17.48■□□□□ 0.39
Col4a1P02463 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Col4a1P02463 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Col4a1P02463 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC17.48■□□□□ 0.39
Col4a1P02463 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC17.48■□□□□ 0.39
Col4a1P02463 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col4a1P02463 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms