Protein–RNA interactions for Protein: P01878

Ig alpha chain C region, mousemouse

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01878 Gm15806-201ENSMUST00000120696 955 ntBASIC14.81□□□□□ -0.04
P01878 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
P01878 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
P01878 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
P01878 Mir7085-201ENSMUST00000184353 66 ntBASIC14.81□□□□□ -0.04
P01878 Ighv8-14-201ENSMUST00000196781 358 ntBASIC14.81□□□□□ -0.04
P01878 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC14.81□□□□□ -0.04
P01878 Gm17795-201ENSMUST00000214505 757 ntBASIC14.81□□□□□ -0.04
P01878 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC14.81□□□□□ -0.04
P01878 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC14.81□□□□□ -0.04
P01878 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
P01878 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC14.81□□□□□ -0.04
P01878 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
P01878 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
P01878 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
P01878 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
P01878 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
P01878 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
P01878 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
P01878 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
P01878 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
P01878 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC14.8□□□□□ -0.04
P01878 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
P01878 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
P01878 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC14.8□□□□□ -0.04
P01878 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
P01878 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC14.8□□□□□ -0.04
P01878 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
P01878 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC14.8□□□□□ -0.04
P01878 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC14.8□□□□□ -0.04
P01878 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
P01878 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
P01878 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
P01878 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
P01878 Gm28911-201ENSMUST00000188837 117 ntBASIC14.8□□□□□ -0.04
P01878 Gm37714-201ENSMUST00000194742 342 ntBASIC14.8□□□□□ -0.04
P01878 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
P01878 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
P01878 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
P01878 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
P01878 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
P01878 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
P01878 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC14.8□□□□□ -0.04
P01878 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
P01878 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
P01878 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC14.8□□□□□ -0.04
P01878 Gm8131-201ENSMUST00000213783 1570 ntBASIC14.8□□□□□ -0.04
P01878 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
P01878 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
P01878 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
P01878 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
P01878 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
P01878 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
P01878 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
P01878 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
P01878 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
P01878 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
P01878 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
P01878 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
P01878 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
P01878 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
P01878 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
P01878 Gm13829-201ENSMUST00000119600 138 ntBASIC14.79□□□□□ -0.04
P01878 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
P01878 Gm17150-201ENSMUST00000165577 381 ntBASIC14.79□□□□□ -0.04
P01878 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
P01878 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
P01878 AC155252.1-201ENSMUST00000226462 1208 ntBASIC14.79□□□□□ -0.04
P01878 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC14.79□□□□□ -0.04
P01878 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
P01878 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
P01878 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
P01878 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
P01878 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
P01878 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
P01878 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
P01878 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
P01878 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
P01878 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC14.78□□□□□ -0.04
P01878 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
P01878 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
P01878 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
P01878 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
P01878 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
P01878 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
P01878 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
P01878 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
P01878 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
P01878 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
P01878 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
P01878 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
P01878 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
P01878 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC14.78□□□□□ -0.04
P01878 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC14.78□□□□□ -0.04
P01878 Gm44719-201ENSMUST00000206404 149 ntBASIC14.78□□□□□ -0.04
P01878 AC139350.3-201ENSMUST00000226151 420 ntBASIC14.78□□□□□ -0.04
P01878 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
P01878 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
P01878 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
P01878 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms