Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
TcraP01849 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
TcraP01849 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
TcraP01849 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
TcraP01849 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
TcraP01849 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
TcraP01849 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
TcraP01849 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC10.59□□□□□ -0.71
TcraP01849 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
TcraP01849 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC10.58□□□□□ -0.71
TcraP01849 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.71
TcraP01849 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
TcraP01849 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
TcraP01849 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
TcraP01849 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC10.58□□□□□ -0.72
TcraP01849 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
TcraP01849 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
TcraP01849 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
TcraP01849 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
TcraP01849 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
TcraP01849 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
TcraP01849 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
TcraP01849 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
TcraP01849 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
TcraP01849 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
TcraP01849 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
TcraP01849 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC10.58□□□□□ -0.72
TcraP01849 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
TcraP01849 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
TcraP01849 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
TcraP01849 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
TcraP01849 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
TcraP01849 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC10.58□□□□□ -0.72
TcraP01849 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
TcraP01849 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
TcraP01849 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC10.58□□□□□ -0.72
TcraP01849 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
TcraP01849 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
TcraP01849 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
TcraP01849 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
TcraP01849 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
TcraP01849 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
TcraP01849 AC159093.1-201ENSMUST00000227779 380 ntBASIC10.58□□□□□ -0.72
TcraP01849 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
TcraP01849 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC10.58□□□□□ -0.72
TcraP01849 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
TcraP01849 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
TcraP01849 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC10.58□□□□□ -0.72
TcraP01849 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
TcraP01849 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
TcraP01849 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
TcraP01849 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
TcraP01849 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC10.58□□□□□ -0.72
TcraP01849 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
TcraP01849 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC10.58□□□□□ -0.72
TcraP01849 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC10.58□□□□□ -0.72
TcraP01849 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
TcraP01849 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
TcraP01849 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
TcraP01849 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
TcraP01849 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
TcraP01849 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
TcraP01849 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
TcraP01849 Gm9947-201ENSMUST00000067599 2920 ntBASIC10.57□□□□□ -0.72
TcraP01849 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
TcraP01849 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
TcraP01849 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
TcraP01849 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
TcraP01849 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
TcraP01849 Gm12500-202ENSMUST00000186471 2428 ntBASIC10.57□□□□□ -0.72
TcraP01849 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
TcraP01849 Gm21009-201ENSMUST00000197169 1669 ntBASIC10.57□□□□□ -0.72
TcraP01849 Gm42769-201ENSMUST00000198576 1659 ntBASIC10.57□□□□□ -0.72
TcraP01849 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
TcraP01849 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
TcraP01849 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
TcraP01849 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
TcraP01849 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
TcraP01849 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
TcraP01849 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
TcraP01849 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC10.57□□□□□ -0.72
TcraP01849 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
TcraP01849 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC10.57□□□□□ -0.72
TcraP01849 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
TcraP01849 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
TcraP01849 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
TcraP01849 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
TcraP01849 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC10.57□□□□□ -0.72
TcraP01849 Gm6659-201ENSMUST00000174752 547 ntBASIC10.57□□□□□ -0.72
TcraP01849 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC10.57□□□□□ -0.72
TcraP01849 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC10.57□□□□□ -0.72
TcraP01849 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
TcraP01849 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
TcraP01849 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
TcraP01849 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
TcraP01849 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
TcraP01849 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
TcraP01849 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
TcraP01849 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
TcraP01849 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms