Protein–RNA interactions for Protein: P01788

Ig heavy chain V region H8, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01788 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
P01788 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
P01788 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
P01788 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
P01788 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
P01788 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
P01788 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
P01788 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
P01788 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
P01788 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
P01788 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
P01788 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
P01788 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
P01788 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
P01788 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
P01788 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
P01788 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC11.46□□□□□ -0.57
P01788 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
P01788 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
P01788 Gm15173-201ENSMUST00000122049 433 ntBASIC11.46□□□□□ -0.57
P01788 Gm15593-201ENSMUST00000122085 1008 ntBASIC11.46□□□□□ -0.57
P01788 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC11.46□□□□□ -0.57
P01788 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
P01788 Gm9726-201ENSMUST00000180321 678 ntBASIC11.46□□□□□ -0.57
P01788 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
P01788 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC11.46□□□□□ -0.57
P01788 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
P01788 Gm34391-201ENSMUST00000203706 907 ntBASIC11.46□□□□□ -0.57
P01788 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
P01788 Gm42471-201ENSMUST00000201457 1865 ntBASIC11.46□□□□□ -0.58
P01788 Gm37691-201ENSMUST00000192147 2573 ntBASIC11.46□□□□□ -0.58
P01788 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC11.46□□□□□ -0.58
P01788 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
P01788 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC11.46□□□□□ -0.58
P01788 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
P01788 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.58
P01788 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
P01788 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
P01788 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
P01788 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
P01788 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
P01788 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
P01788 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
P01788 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
P01788 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC11.45□□□□□ -0.58
P01788 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC11.45□□□□□ -0.58
P01788 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
P01788 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
P01788 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
P01788 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
P01788 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
P01788 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
P01788 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
P01788 Gm7222-201ENSMUST00000117512 906 ntBASIC11.45□□□□□ -0.58
P01788 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC11.45□□□□□ -0.58
P01788 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
P01788 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
P01788 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
P01788 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC11.45□□□□□ -0.58
P01788 Gm6376-201ENSMUST00000209407 580 ntBASIC11.45□□□□□ -0.58
P01788 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
P01788 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
P01788 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC11.45□□□□□ -0.58
P01788 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
P01788 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
P01788 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
P01788 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC11.45□□□□□ -0.58
P01788 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
P01788 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
P01788 AC126250.1-201ENSMUST00000228343 1768 ntBASIC11.45□□□□□ -0.58
P01788 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
P01788 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
P01788 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
P01788 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
P01788 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
P01788 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
P01788 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
P01788 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
P01788 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
P01788 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
P01788 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC11.45□□□□□ -0.58
P01788 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
P01788 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
P01788 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC11.44□□□□□ -0.58
P01788 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
P01788 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
P01788 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
P01788 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
P01788 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
P01788 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
P01788 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
P01788 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
P01788 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
P01788 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC11.44□□□□□ -0.58
P01788 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
P01788 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
P01788 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
P01788 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
P01788 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC11.44□□□□□ -0.58
P01788 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms