Protein–RNA interactions for Protein: O89016

Abcd4, ATP-binding cassette sub-family D member 4, mousemouse

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd4O89016 Gm8597-201ENSMUST00000191525 1109 ntBASIC13.15□□□□□ -0.3
Abcd4O89016 Gm38225-201ENSMUST00000194001 393 ntBASIC13.15□□□□□ -0.3
Abcd4O89016 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Abcd4O89016 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Abcd4O89016 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Abcd4O89016 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Abcd4O89016 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Abcd4O89016 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Abcd4O89016 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Abcd4O89016 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Abcd4O89016 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Abcd4O89016 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Abcd4O89016 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Abcd4O89016 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Abcd4O89016 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Abcd4O89016 AC154767.3-201ENSMUST00000225150 1342 ntBASIC13.14□□□□□ -0.31
Abcd4O89016 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Abcd4O89016 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC13.14□□□□□ -0.31
Abcd4O89016 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
Abcd4O89016 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC13.14□□□□□ -0.31
Abcd4O89016 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Abcd4O89016 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Abcd4O89016 Gm13233-201ENSMUST00000118760 1443 ntBASIC13.14□□□□□ -0.31
Abcd4O89016 Gm13244-201ENSMUST00000118855 1446 ntBASIC13.14□□□□□ -0.31
Abcd4O89016 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Abcd4O89016 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Abcd4O89016 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Abcd4O89016 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
Abcd4O89016 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Abcd4O89016 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Abcd4O89016 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Abcd4O89016 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Abcd4O89016 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Abcd4O89016 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC13.14□□□□□ -0.31
Abcd4O89016 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Abcd4O89016 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Abcd4O89016 Mir7023-201ENSMUST00000185093 64 ntBASIC13.14□□□□□ -0.31
Abcd4O89016 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Abcd4O89016 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC13.14□□□□□ -0.31
Abcd4O89016 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Abcd4O89016 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Abcd4O89016 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Abcd4O89016 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Abcd4O89016 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Abcd4O89016 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Abcd4O89016 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Abcd4O89016 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Abcd4O89016 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Abcd4O89016 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Abcd4O89016 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Abcd4O89016 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Abcd4O89016 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Abcd4O89016 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Abcd4O89016 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
Abcd4O89016 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Abcd4O89016 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Abcd4O89016 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC13.13□□□□□ -0.31
Abcd4O89016 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Abcd4O89016 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Abcd4O89016 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Abcd4O89016 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Abcd4O89016 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Abcd4O89016 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Abcd4O89016 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Abcd4O89016 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Abcd4O89016 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC13.13□□□□□ -0.31
Abcd4O89016 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Abcd4O89016 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
Abcd4O89016 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Abcd4O89016 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC13.13□□□□□ -0.31
Abcd4O89016 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Abcd4O89016 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Abcd4O89016 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Abcd4O89016 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Abcd4O89016 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Abcd4O89016 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC13.13□□□□□ -0.31
Abcd4O89016 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC13.13□□□□□ -0.31
Abcd4O89016 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Abcd4O89016 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC13.13□□□□□ -0.31
Abcd4O89016 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Abcd4O89016 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC13.13□□□□□ -0.31
Abcd4O89016 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Abcd4O89016 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Abcd4O89016 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Abcd4O89016 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Abcd4O89016 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Abcd4O89016 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Abcd4O89016 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
Abcd4O89016 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Abcd4O89016 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Abcd4O89016 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Abcd4O89016 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Abcd4O89016 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Abcd4O89016 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Abcd4O89016 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Abcd4O89016 Gm11839-201ENSMUST00000120647 1953 ntBASIC13.12□□□□□ -0.31
Abcd4O89016 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Abcd4O89016 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Abcd4O89016 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Abcd4O89016 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms