Protein–RNA interactions for Protein: O88705

Hcn3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn3O88705 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Hcn3O88705 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hcn3O88705 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hcn3O88705 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Hcn3O88705 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hcn3O88705 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hcn3O88705 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hcn3O88705 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Hcn3O88705 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Hcn3O88705 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Hcn3O88705 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hcn3O88705 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hcn3O88705 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hcn3O88705 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Hcn3O88705 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hcn3O88705 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
Hcn3O88705 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Hcn3O88705 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC13.88□□□□□ -0.19
Hcn3O88705 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC13.88□□□□□ -0.19
Hcn3O88705 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Hcn3O88705 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC13.88□□□□□ -0.19
Hcn3O88705 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hcn3O88705 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hcn3O88705 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC13.88□□□□□ -0.19
Hcn3O88705 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Hcn3O88705 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hcn3O88705 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Hcn3O88705 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hcn3O88705 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Hcn3O88705 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Hcn3O88705 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hcn3O88705 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hcn3O88705 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hcn3O88705 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Hcn3O88705 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hcn3O88705 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hcn3O88705 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hcn3O88705 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hcn3O88705 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hcn3O88705 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Hcn3O88705 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hcn3O88705 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Hcn3O88705 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hcn3O88705 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hcn3O88705 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hcn3O88705 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Hcn3O88705 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hcn3O88705 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Hcn3O88705 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
Hcn3O88705 Gm11452-201ENSMUST00000122376 690 ntBASIC13.87□□□□□ -0.19
Hcn3O88705 Gm4535-201ENSMUST00000182274 558 ntBASIC13.87□□□□□ -0.19
Hcn3O88705 Gm37584-201ENSMUST00000193595 1290 ntBASIC13.87□□□□□ -0.19
Hcn3O88705 Gm5864-201ENSMUST00000202263 970 ntBASIC13.87□□□□□ -0.19
Hcn3O88705 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC13.87□□□□□ -0.19
Hcn3O88705 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Hcn3O88705 Gm6376-201ENSMUST00000209407 580 ntBASIC13.87□□□□□ -0.19
Hcn3O88705 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC13.87□□□□□ -0.19
Hcn3O88705 Gm6296-201ENSMUST00000222599 943 ntBASIC13.87□□□□□ -0.19
Hcn3O88705 AC155729.1-201ENSMUST00000227758 544 ntBASIC13.87□□□□□ -0.19
Hcn3O88705 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hcn3O88705 Rps4l-201ENSMUST00000071745 943 ntBASIC13.87□□□□□ -0.19
Hcn3O88705 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hcn3O88705 Gm10355-201ENSMUST00000097146 517 ntBASIC13.87□□□□□ -0.19
Hcn3O88705 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC13.87□□□□□ -0.19
Hcn3O88705 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hcn3O88705 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hcn3O88705 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Hcn3O88705 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hcn3O88705 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hcn3O88705 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hcn3O88705 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Hcn3O88705 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Hcn3O88705 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hcn3O88705 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC13.86□□□□□ -0.19
Hcn3O88705 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hcn3O88705 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hcn3O88705 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hcn3O88705 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hcn3O88705 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hcn3O88705 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC13.86□□□□□ -0.19
Hcn3O88705 Gm42928-201ENSMUST00000197338 3339 ntBASIC13.86□□□□□ -0.19
Hcn3O88705 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hcn3O88705 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Hcn3O88705 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC13.86□□□□□ -0.19
Hcn3O88705 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Hcn3O88705 Mir8098-201ENSMUST00000184011 137 ntBASIC13.86□□□□□ -0.19
Hcn3O88705 Gm28659-201ENSMUST00000188013 759 ntBASIC13.86□□□□□ -0.19
Hcn3O88705 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC13.86□□□□□ -0.19
Hcn3O88705 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hcn3O88705 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Hcn3O88705 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC13.86□□□□□ -0.19
Hcn3O88705 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Hcn3O88705 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hcn3O88705 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Hcn3O88705 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Hcn3O88705 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hcn3O88705 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hcn3O88705 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
Hcn3O88705 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Hcn3O88705 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 65 ms