Protein–RNA interactions for Protein: O88545

Cops6, COP9 signalosome complex subunit 6, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops6O88545 Gm9908-201ENSMUST00000211534 448 ntBASIC17.63■□□□□ 0.41
Cops6O88545 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cops6O88545 AC154806.6-201ENSMUST00000228192 202 ntBASIC17.63■□□□□ 0.41
Cops6O88545 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cops6O88545 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cops6O88545 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cops6O88545 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cops6O88545 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cops6O88545 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cops6O88545 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cops6O88545 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Cops6O88545 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cops6O88545 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cops6O88545 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cops6O88545 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cops6O88545 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cops6O88545 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cops6O88545 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cops6O88545 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cops6O88545 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Cops6O88545 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC17.62■□□□□ 0.41
Cops6O88545 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC17.62■□□□□ 0.41
Cops6O88545 Gm12091-201ENSMUST00000146791 830 ntBASIC17.62■□□□□ 0.41
Cops6O88545 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC17.62■□□□□ 0.41
Cops6O88545 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC17.62■□□□□ 0.41
Cops6O88545 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cops6O88545 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cops6O88545 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cops6O88545 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cops6O88545 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cops6O88545 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Cops6O88545 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cops6O88545 Gm13034-201ENSMUST00000121342 3177 ntBASIC17.62■□□□□ 0.41
Cops6O88545 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Cops6O88545 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cops6O88545 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cops6O88545 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Cops6O88545 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Cops6O88545 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cops6O88545 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cops6O88545 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cops6O88545 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC17.61■□□□□ 0.41
Cops6O88545 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
Cops6O88545 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cops6O88545 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC17.61■□□□□ 0.41
Cops6O88545 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cops6O88545 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cops6O88545 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cops6O88545 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cops6O88545 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cops6O88545 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC17.61■□□□□ 0.41
Cops6O88545 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cops6O88545 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC17.61■□□□□ 0.41
Cops6O88545 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Cops6O88545 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cops6O88545 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC17.61■□□□□ 0.41
Cops6O88545 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Cops6O88545 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cops6O88545 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Cops6O88545 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cops6O88545 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cops6O88545 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cops6O88545 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cops6O88545 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cops6O88545 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cops6O88545 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cops6O88545 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cops6O88545 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
Cops6O88545 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Cops6O88545 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cops6O88545 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cops6O88545 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cops6O88545 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cops6O88545 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cops6O88545 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cops6O88545 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cops6O88545 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cops6O88545 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cops6O88545 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC17.6■□□□□ 0.41
Cops6O88545 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC17.6■□□□□ 0.41
Cops6O88545 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC17.6■□□□□ 0.41
Cops6O88545 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC17.6■□□□□ 0.41
Cops6O88545 Gm18624-201ENSMUST00000220966 658 ntBASIC17.6■□□□□ 0.41
Cops6O88545 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC17.6■□□□□ 0.41
Cops6O88545 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cops6O88545 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cops6O88545 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cops6O88545 Gm9115-201ENSMUST00000120192 1348 ntBASIC17.6■□□□□ 0.41
Cops6O88545 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cops6O88545 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cops6O88545 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Cops6O88545 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cops6O88545 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cops6O88545 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cops6O88545 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Cops6O88545 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cops6O88545 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cops6O88545 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC17.6■□□□□ 0.41
Cops6O88545 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC17.6■□□□□ 0.41
Cops6O88545 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms