Protein–RNA interactions for Protein: O88472

Tnfrsf17, Tumor necrosis factor receptor superfamily member 17, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf17O88472 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tnfrsf17O88472 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tnfrsf17O88472 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC13.41□□□□□ -0.26
Tnfrsf17O88472 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tnfrsf17O88472 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tnfrsf17O88472 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC13.4□□□□□ -0.26
Tnfrsf17O88472 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Tnfrsf17O88472 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tnfrsf17O88472 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tnfrsf17O88472 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tnfrsf17O88472 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tnfrsf17O88472 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC13.4□□□□□ -0.26
Tnfrsf17O88472 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tnfrsf17O88472 Dctn4-202ENSMUST00000223590 1530 ntBASIC13.4□□□□□ -0.26
Tnfrsf17O88472 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tnfrsf17O88472 Gm13464-201ENSMUST00000119418 935 ntBASIC13.4□□□□□ -0.26
Tnfrsf17O88472 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tnfrsf17O88472 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Tnfrsf17O88472 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tnfrsf17O88472 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Tnfrsf17O88472 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC13.4□□□□□ -0.26
Tnfrsf17O88472 Gm18934-201ENSMUST00000216671 1044 ntBASIC13.4□□□□□ -0.26
Tnfrsf17O88472 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC13.4□□□□□ -0.26
Tnfrsf17O88472 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Tnfrsf17O88472 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Tnfrsf17O88472 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tnfrsf17O88472 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tnfrsf17O88472 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tnfrsf17O88472 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tnfrsf17O88472 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tnfrsf17O88472 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tnfrsf17O88472 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tnfrsf17O88472 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tnfrsf17O88472 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tnfrsf17O88472 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Tnfrsf17O88472 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Tnfrsf17O88472 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfrsf17O88472 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC13.39□□□□□ -0.27
Tnfrsf17O88472 BC001981-202ENSMUST00000191393 1545 ntBASIC13.39□□□□□ -0.27
Tnfrsf17O88472 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfrsf17O88472 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfrsf17O88472 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfrsf17O88472 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfrsf17O88472 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfrsf17O88472 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Tnfrsf17O88472 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfrsf17O88472 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfrsf17O88472 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfrsf17O88472 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Tnfrsf17O88472 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfrsf17O88472 Gm10327-201ENSMUST00000105222 1002 ntBASIC13.39□□□□□ -0.27
Tnfrsf17O88472 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfrsf17O88472 Gm4691-201ENSMUST00000182339 1000 ntBASIC13.39□□□□□ -0.27
Tnfrsf17O88472 Gm27514-201ENSMUST00000183692 110 ntBASIC13.39□□□□□ -0.27
Tnfrsf17O88472 Gm2451-201ENSMUST00000199447 999 ntBASIC13.39□□□□□ -0.27
Tnfrsf17O88472 AC153872.1-201ENSMUST00000199539 128 ntBASIC13.39□□□□□ -0.27
Tnfrsf17O88472 Gm43822-201ENSMUST00000200285 476 ntBASIC13.39□□□□□ -0.27
Tnfrsf17O88472 Gm10290-201ENSMUST00000200451 999 ntBASIC13.39□□□□□ -0.27
Tnfrsf17O88472 Gm17795-201ENSMUST00000214505 757 ntBASIC13.39□□□□□ -0.27
Tnfrsf17O88472 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfrsf17O88472 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC13.39□□□□□ -0.27
Tnfrsf17O88472 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfrsf17O88472 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Tnfrsf17O88472 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfrsf17O88472 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC13.39□□□□□ -0.27
Tnfrsf17O88472 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Tnfrsf17O88472 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfrsf17O88472 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfrsf17O88472 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
Tnfrsf17O88472 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfrsf17O88472 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfrsf17O88472 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfrsf17O88472 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfrsf17O88472 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfrsf17O88472 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Tnfrsf17O88472 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfrsf17O88472 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Tnfrsf17O88472 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfrsf17O88472 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfrsf17O88472 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfrsf17O88472 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfrsf17O88472 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfrsf17O88472 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfrsf17O88472 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC13.39□□□□□ -0.27
Tnfrsf17O88472 Gm45667-201ENSMUST00000210380 1316 ntBASIC13.39□□□□□ -0.27
Tnfrsf17O88472 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tnfrsf17O88472 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC13.38□□□□□ -0.27
Tnfrsf17O88472 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Tnfrsf17O88472 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
Tnfrsf17O88472 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC13.38□□□□□ -0.27
Tnfrsf17O88472 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tnfrsf17O88472 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tnfrsf17O88472 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tnfrsf17O88472 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tnfrsf17O88472 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tnfrsf17O88472 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC13.38□□□□□ -0.27
Tnfrsf17O88472 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tnfrsf17O88472 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tnfrsf17O88472 Gm12384-201ENSMUST00000119228 919 ntBASIC13.38□□□□□ -0.27
Tnfrsf17O88472 Gm13350-201ENSMUST00000120519 479 ntBASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms