Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Col5a1O88207 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Col5a1O88207 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC12.89□□□□□ -0.35
Col5a1O88207 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col5a1O88207 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col5a1O88207 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Col5a1O88207 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col5a1O88207 Gm38230-201ENSMUST00000193572 1159 ntBASIC12.88□□□□□ -0.35
Col5a1O88207 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC12.88□□□□□ -0.35
Col5a1O88207 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Col5a1O88207 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Col5a1O88207 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC12.88□□□□□ -0.35
Col5a1O88207 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col5a1O88207 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Col5a1O88207 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col5a1O88207 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
Col5a1O88207 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col5a1O88207 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Col5a1O88207 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col5a1O88207 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Col5a1O88207 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col5a1O88207 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Col5a1O88207 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col5a1O88207 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col5a1O88207 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
Col5a1O88207 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Col5a1O88207 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col5a1O88207 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Col5a1O88207 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col5a1O88207 Gm12176-201ENSMUST00000121420 875 ntBASIC12.88□□□□□ -0.35
Col5a1O88207 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
Col5a1O88207 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC12.88□□□□□ -0.35
Col5a1O88207 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC12.88□□□□□ -0.35
Col5a1O88207 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC12.88□□□□□ -0.35
Col5a1O88207 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC12.88□□□□□ -0.35
Col5a1O88207 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col5a1O88207 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Col5a1O88207 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col5a1O88207 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col5a1O88207 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col5a1O88207 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Col5a1O88207 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Col5a1O88207 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col5a1O88207 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col5a1O88207 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC12.87□□□□□ -0.35
Col5a1O88207 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col5a1O88207 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col5a1O88207 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col5a1O88207 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col5a1O88207 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col5a1O88207 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC12.87□□□□□ -0.35
Col5a1O88207 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Col5a1O88207 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col5a1O88207 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col5a1O88207 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col5a1O88207 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC12.87□□□□□ -0.35
Col5a1O88207 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC12.87□□□□□ -0.35
Col5a1O88207 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Col5a1O88207 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Col5a1O88207 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Col5a1O88207 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Col5a1O88207 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col5a1O88207 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col5a1O88207 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Col5a1O88207 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col5a1O88207 Gm38037-201ENSMUST00000192600 1624 ntBASIC12.87□□□□□ -0.35
Col5a1O88207 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Col5a1O88207 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col5a1O88207 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col5a1O88207 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col5a1O88207 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col5a1O88207 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col5a1O88207 Gm14451-201ENSMUST00000121581 1542 ntBASIC12.86□□□□□ -0.35
Col5a1O88207 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC12.86□□□□□ -0.35
Col5a1O88207 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Col5a1O88207 Gm37466-201ENSMUST00000195692 652 ntBASIC12.86□□□□□ -0.35
Col5a1O88207 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col5a1O88207 Gm17795-201ENSMUST00000214505 757 ntBASIC12.86□□□□□ -0.35
Col5a1O88207 Gm17794-201ENSMUST00000220252 955 ntBASIC12.86□□□□□ -0.35
Col5a1O88207 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Col5a1O88207 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col5a1O88207 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Col5a1O88207 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Col5a1O88207 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col5a1O88207 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col5a1O88207 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col5a1O88207 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col5a1O88207 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col5a1O88207 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col5a1O88207 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Col5a1O88207 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col5a1O88207 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col5a1O88207 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col5a1O88207 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Col5a1O88207 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col5a1O88207 Gm4804-201ENSMUST00000182234 999 ntBASIC12.85□□□□□ -0.35
Col5a1O88207 Gm4971-201ENSMUST00000205991 1108 ntBASIC12.85□□□□□ -0.35
Col5a1O88207 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC12.85□□□□□ -0.35
Col5a1O88207 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Col5a1O88207 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms