Protein–RNA interactions for Protein: O54943

Per2, Period circadian protein homolog 2, mousemouse

Predictions only

Length 1,257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Per2O54943 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Per2O54943 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC15.11■□□□□ 0.01
Per2O54943 Ksr1-207ENSMUST00000226282 5260 ntBASIC15.11■□□□□ 0.01
Per2O54943 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Per2O54943 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Per2O54943 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Per2O54943 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Per2O54943 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Per2O54943 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Per2O54943 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Per2O54943 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Per2O54943 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Per2O54943 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Per2O54943 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Per2O54943 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Per2O54943 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Per2O54943 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Per2O54943 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Per2O54943 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Per2O54943 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Per2O54943 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC15.1■□□□□ 0.01
Per2O54943 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Per2O54943 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Per2O54943 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Per2O54943 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC15.1■□□□□ 0.01
Per2O54943 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC15.1■□□□□ 0.01
Per2O54943 Gm15483-201ENSMUST00000120338 456 ntBASIC15.1■□□□□ 0.01
Per2O54943 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Per2O54943 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
Per2O54943 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Per2O54943 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
Per2O54943 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC15.1■□□□□ 0.01
Per2O54943 Rpph1-201ENSMUST00000175096 319 ntBASIC15.1■□□□□ 0.01
Per2O54943 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC15.1■□□□□ 0.01
Per2O54943 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC15.1■□□□□ 0.01
Per2O54943 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Per2O54943 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Per2O54943 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Per2O54943 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Per2O54943 Sorbs3-204ENSMUST00000227929 2460 ntBASIC15.1■□□□□ 0.01
Per2O54943 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Per2O54943 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Per2O54943 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Per2O54943 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Per2O54943 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Per2O54943 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Per2O54943 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Per2O54943 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Per2O54943 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Per2O54943 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC15.1■□□□□ 0.01
Per2O54943 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Per2O54943 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Per2O54943 Gm9252-201ENSMUST00000172364 1602 ntBASIC15.1■□□□□ 0.01
Per2O54943 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Per2O54943 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Per2O54943 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Per2O54943 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Per2O54943 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Per2O54943 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Per2O54943 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Per2O54943 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC15.09■□□□□ 0.01
Per2O54943 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Per2O54943 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Per2O54943 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Per2O54943 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC15.09■□□□□ 0.01
Per2O54943 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Per2O54943 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Per2O54943 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Per2O54943 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Per2O54943 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC15.09■□□□□ 0.01
Per2O54943 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Per2O54943 Gm5479-201ENSMUST00000160578 435 ntBASIC15.09■□□□□ 0.01
Per2O54943 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC15.09■□□□□ 0.01
Per2O54943 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Per2O54943 Gm44771-201ENSMUST00000206975 626 ntBASIC15.09■□□□□ 0.01
Per2O54943 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC15.09■□□□□ 0.01
Per2O54943 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Per2O54943 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC15.09■□□□□ 0.01
Per2O54943 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Per2O54943 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Per2O54943 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Per2O54943 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Per2O54943 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Per2O54943 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Per2O54943 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Per2O54943 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Per2O54943 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC15.08■□□□□ 0.01
Per2O54943 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Per2O54943 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Per2O54943 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Per2O54943 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Per2O54943 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC15.08■□□□□ 0
Per2O54943 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC15.08■□□□□ 0
Per2O54943 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC15.08■□□□□ 0
Per2O54943 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC15.08■□□□□ 0
Per2O54943 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Per2O54943 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC15.08■□□□□ 0
Per2O54943 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC15.08■□□□□ 0
Per2O54943 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Per2O54943 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms