Protein–RNA interactions for Protein: O54908

Dkk1, Dickkopf-related protein 1, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dkk1O54908 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Dkk1O54908 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Dkk1O54908 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Dkk1O54908 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Dkk1O54908 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Dkk1O54908 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Dkk1O54908 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Dkk1O54908 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Dkk1O54908 Gm12940-202ENSMUST00000137236 1970 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Dkk1O54908 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Dkk1O54908 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Dkk1O54908 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC13.07□□□□□ -0.32
Dkk1O54908 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Dkk1O54908 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Dkk1O54908 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Dkk1O54908 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Dkk1O54908 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Dkk1O54908 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Dkk1O54908 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Dkk1O54908 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Dkk1O54908 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Dkk1O54908 Gm10563-201ENSMUST00000115821 237 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Dkk1O54908 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC13.07□□□□□ -0.32
Dkk1O54908 Gm13941-201ENSMUST00000127918 736 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
Dkk1O54908 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Dkk1O54908 Crem-229ENSMUST00000151084 957 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Dkk1O54908 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Dkk1O54908 Taf1d-202ENSMUST00000164079 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Dkk1O54908 Gm6047-201ENSMUST00000167221 574 ntBASIC13.07□□□□□ -0.32
Dkk1O54908 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC13.07□□□□□ -0.32
Dkk1O54908 Gm26832-201ENSMUST00000181456 1282 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Dkk1O54908 Gm37727-201ENSMUST00000191637 819 ntBASIC13.07□□□□□ -0.32
Dkk1O54908 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC13.07□□□□□ -0.32
Dkk1O54908 Gm43884-201ENSMUST00000204251 559 ntBASIC13.07□□□□□ -0.32
Dkk1O54908 Olfr209-203ENSMUST00000208875 1194 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Dkk1O54908 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC13.07□□□□□ -0.32
Dkk1O54908 AC160030.1-201ENSMUST00000218916 506 ntTSL 2 BASIC13.07□□□□□ -0.32
Dkk1O54908 AC157654.1-201ENSMUST00000224130 820 ntBASIC13.07□□□□□ -0.32
Dkk1O54908 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Dkk1O54908 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Dkk1O54908 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC13.07□□□□□ -0.32
Dkk1O54908 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Dkk1O54908 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Dkk1O54908 Olfr154-201ENSMUST00000099918 1079 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Dkk1O54908 Cpvl-202ENSMUST00000203101 1488 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Dkk1O54908 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Dkk1O54908 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Dkk1O54908 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Dkk1O54908 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Dkk1O54908 1700080N15Rik-202ENSMUST00000154360 1316 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Dkk1O54908 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Dkk1O54908 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Dkk1O54908 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Dkk1O54908 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Dkk1O54908 Gm44090-201ENSMUST00000204669 1834 ntBASIC13.06□□□□□ -0.32
Dkk1O54908 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Dkk1O54908 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Dkk1O54908 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Dkk1O54908 Gap43-201ENSMUST00000102817 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Dkk1O54908 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Dkk1O54908 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Dkk1O54908 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC13.06□□□□□ -0.32
Dkk1O54908 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Dkk1O54908 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC13.06□□□□□ -0.32
Dkk1O54908 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Dkk1O54908 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Dkk1O54908 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Dkk1O54908 Gm14140-201ENSMUST00000119999 995 ntBASIC13.06□□□□□ -0.32
Dkk1O54908 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC13.06□□□□□ -0.32
Dkk1O54908 Gm15104-201ENSMUST00000132626 842 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Dkk1O54908 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Dkk1O54908 Gm13184-201ENSMUST00000149932 626 ntTSL 3 BASIC13.06□□□□□ -0.32
Dkk1O54908 Gm17258-201ENSMUST00000168462 1266 ntBASIC13.06□□□□□ -0.32
Dkk1O54908 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Dkk1O54908 Gm37490-201ENSMUST00000195566 724 ntBASIC13.06□□□□□ -0.32
Dkk1O54908 Gm43629-201ENSMUST00000201782 704 ntBASIC13.06□□□□□ -0.32
Dkk1O54908 Gm6290-201ENSMUST00000207666 1158 ntBASIC13.06□□□□□ -0.32
Dkk1O54908 D830005E20Rik-202ENSMUST00000219691 971 ntTSL 5 BASIC13.06□□□□□ -0.32
Dkk1O54908 AC166830.1-201ENSMUST00000224201 533 ntBASIC13.06□□□□□ -0.32
Dkk1O54908 Vmn1r38-203ENSMUST00000227694 909 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Dkk1O54908 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Dkk1O54908 Vmn1r37-201ENSMUST00000077482 909 ntAPPRIS P2 BASIC13.06□□□□□ -0.32
Dkk1O54908 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Dkk1O54908 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Dkk1O54908 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Dkk1O54908 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Dkk1O54908 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC13.06□□□□□ -0.32
Dkk1O54908 AC122901.1-201ENSMUST00000214203 1790 ntBASIC13.06□□□□□ -0.32
Dkk1O54908 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Dkk1O54908 Snx7-205ENSMUST00000198499 1314 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Dkk1O54908 Milr1-201ENSMUST00000086353 1348 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Dkk1O54908 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Dkk1O54908 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Dkk1O54908 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Dkk1O54908 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Dkk1O54908 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Dkk1O54908 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
Dkk1O54908 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Dkk1O54908 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Dkk1O54908 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms