Protein–RNA interactions for Protein: O35526

Stx1a, Syntaxin-1A, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stx1aO35526 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Stx1aO35526 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
Stx1aO35526 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC16.3■□□□□ 0.2
Stx1aO35526 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Stx1aO35526 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Stx1aO35526 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
Stx1aO35526 Gm5366-201ENSMUST00000215494 1338 ntBASIC16.3■□□□□ 0.2
Stx1aO35526 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Stx1aO35526 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Stx1aO35526 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Stx1aO35526 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Stx1aO35526 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Stx1aO35526 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Stx1aO35526 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Stx1aO35526 Gm4899-201ENSMUST00000178708 719 ntBASIC16.3■□□□□ 0.2
Stx1aO35526 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Stx1aO35526 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Stx1aO35526 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Stx1aO35526 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
Stx1aO35526 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Stx1aO35526 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Stx1aO35526 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Stx1aO35526 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Stx1aO35526 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Stx1aO35526 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Stx1aO35526 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Stx1aO35526 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Stx1aO35526 Gm18856-201ENSMUST00000178096 1374 ntBASIC16.29■□□□□ 0.2
Stx1aO35526 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Stx1aO35526 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Stx1aO35526 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
Stx1aO35526 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Stx1aO35526 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC16.29■□□□□ 0.2
Stx1aO35526 Gm15173-201ENSMUST00000122049 433 ntBASIC16.29■□□□□ 0.2
Stx1aO35526 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Stx1aO35526 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC16.29■□□□□ 0.2
Stx1aO35526 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Stx1aO35526 Spr-ps1-201ENSMUST00000089584 605 ntBASIC16.29■□□□□ 0.2
Stx1aO35526 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
Stx1aO35526 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Stx1aO35526 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Stx1aO35526 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Stx1aO35526 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Stx1aO35526 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Stx1aO35526 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Stx1aO35526 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Stx1aO35526 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Stx1aO35526 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Stx1aO35526 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Stx1aO35526 Gm37411-201ENSMUST00000194180 2282 ntBASIC16.28■□□□□ 0.2
Stx1aO35526 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Stx1aO35526 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC16.28■□□□□ 0.2
Stx1aO35526 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Stx1aO35526 Gm7230-201ENSMUST00000173026 815 ntBASIC16.28■□□□□ 0.2
Stx1aO35526 Gm6550-201ENSMUST00000187574 993 ntBASIC16.28■□□□□ 0.2
Stx1aO35526 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC16.28■□□□□ 0.2
Stx1aO35526 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Stx1aO35526 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Stx1aO35526 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Stx1aO35526 Gm8096-201ENSMUST00000209921 1591 ntBASIC16.28■□□□□ 0.2
Stx1aO35526 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC16.28■□□□□ 0.2
Stx1aO35526 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Stx1aO35526 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Stx1aO35526 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Stx1aO35526 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Stx1aO35526 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC16.28■□□□□ 0.2
Stx1aO35526 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC16.28■□□□□ 0.2
Stx1aO35526 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Stx1aO35526 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Stx1aO35526 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Stx1aO35526 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Stx1aO35526 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Stx1aO35526 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Stx1aO35526 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Stx1aO35526 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Stx1aO35526 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Stx1aO35526 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Stx1aO35526 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
Stx1aO35526 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Stx1aO35526 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Stx1aO35526 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Stx1aO35526 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Stx1aO35526 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Stx1aO35526 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Stx1aO35526 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Stx1aO35526 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Stx1aO35526 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Stx1aO35526 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Stx1aO35526 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC16.27■□□□□ 0.2
Stx1aO35526 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Stx1aO35526 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Stx1aO35526 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Stx1aO35526 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Stx1aO35526 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Stx1aO35526 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC16.27■□□□□ 0.19
Stx1aO35526 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Stx1aO35526 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC16.27■□□□□ 0.19
Stx1aO35526 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Stx1aO35526 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.19
Stx1aO35526 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms