Protein–RNA interactions for Protein: O35451

Atf6b, Cyclic AMP-dependent transcription factor ATF-6 beta, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6bO35451 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Atf6bO35451 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Atf6bO35451 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Atf6bO35451 Nrn1-204ENSMUST00000224323 1779 ntBASIC12.6□□□□□ -0.39
Atf6bO35451 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Atf6bO35451 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Atf6bO35451 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Atf6bO35451 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Atf6bO35451 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Atf6bO35451 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Atf6bO35451 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Atf6bO35451 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Atf6bO35451 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Atf6bO35451 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Atf6bO35451 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Atf6bO35451 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Atf6bO35451 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Atf6bO35451 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Atf6bO35451 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Atf6bO35451 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Atf6bO35451 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Atf6bO35451 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Atf6bO35451 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
Atf6bO35451 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Atf6bO35451 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Atf6bO35451 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Atf6bO35451 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Atf6bO35451 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Atf6bO35451 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Atf6bO35451 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Atf6bO35451 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Atf6bO35451 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Atf6bO35451 Mir1895-201ENSMUST00000122615 79 ntBASIC12.59□□□□□ -0.39
Atf6bO35451 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Atf6bO35451 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Atf6bO35451 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Atf6bO35451 Gm8597-201ENSMUST00000191525 1109 ntBASIC12.59□□□□□ -0.39
Atf6bO35451 Gm43575-201ENSMUST00000196420 516 ntBASIC12.59□□□□□ -0.39
Atf6bO35451 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Atf6bO35451 Gm20553-201ENSMUST00000204205 844 ntBASIC12.59□□□□□ -0.39
Atf6bO35451 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC12.59□□□□□ -0.39
Atf6bO35451 AC155252.2-201ENSMUST00000226946 680 ntBASIC12.59□□□□□ -0.39
Atf6bO35451 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Atf6bO35451 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Atf6bO35451 Gm5867-201ENSMUST00000063197 592 ntBASIC12.59□□□□□ -0.39
Atf6bO35451 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC12.59□□□□□ -0.39
Atf6bO35451 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Atf6bO35451 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Atf6bO35451 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Atf6bO35451 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
Atf6bO35451 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Atf6bO35451 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Atf6bO35451 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Atf6bO35451 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Atf6bO35451 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Atf6bO35451 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Atf6bO35451 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Atf6bO35451 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Atf6bO35451 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Atf6bO35451 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC12.59□□□□□ -0.39
Atf6bO35451 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Atf6bO35451 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Atf6bO35451 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Atf6bO35451 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Atf6bO35451 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Atf6bO35451 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Atf6bO35451 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Atf6bO35451 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Atf6bO35451 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Atf6bO35451 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Atf6bO35451 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Atf6bO35451 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Atf6bO35451 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Atf6bO35451 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Atf6bO35451 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Atf6bO35451 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Atf6bO35451 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Atf6bO35451 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Atf6bO35451 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Atf6bO35451 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC12.58□□□□□ -0.4
Atf6bO35451 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC12.58□□□□□ -0.4
Atf6bO35451 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Atf6bO35451 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC12.58□□□□□ -0.4
Atf6bO35451 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC12.58□□□□□ -0.4
Atf6bO35451 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Atf6bO35451 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC12.58□□□□□ -0.4
Atf6bO35451 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC12.58□□□□□ -0.4
Atf6bO35451 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Atf6bO35451 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Atf6bO35451 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Atf6bO35451 Gpr146-202ENSMUST00000053120 1040 ntBASIC12.58□□□□□ -0.4
Atf6bO35451 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Atf6bO35451 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Atf6bO35451 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Atf6bO35451 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Atf6bO35451 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Atf6bO35451 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Atf6bO35451 CT025610.1-201ENSMUST00000224552 1786 ntBASIC12.58□□□□□ -0.4
Atf6bO35451 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Atf6bO35451 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms