Protein–RNA interactions for Protein: O35449

Prrt1, Proline-rich transmembrane protein 1, mousemouse

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prrt1O35449 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Prrt1O35449 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Prrt1O35449 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Prrt1O35449 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Prrt1O35449 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Prrt1O35449 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Prrt1O35449 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Prrt1O35449 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Prrt1O35449 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC12.25□□□□□ -0.45
Prrt1O35449 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Prrt1O35449 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC12.25□□□□□ -0.45
Prrt1O35449 Gm37844-201ENSMUST00000192473 4097 ntBASIC12.25□□□□□ -0.45
Prrt1O35449 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Prrt1O35449 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Prrt1O35449 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC12.25□□□□□ -0.45
Prrt1O35449 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Prrt1O35449 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Prrt1O35449 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Prrt1O35449 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Prrt1O35449 AC121805.2-201ENSMUST00000218808 2538 ntBASIC12.25□□□□□ -0.45
Prrt1O35449 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Prrt1O35449 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Prrt1O35449 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Prrt1O35449 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Prrt1O35449 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Prrt1O35449 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Prrt1O35449 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Prrt1O35449 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC12.24□□□□□ -0.45
Prrt1O35449 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Prrt1O35449 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Prrt1O35449 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Prrt1O35449 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Prrt1O35449 Gm6345-202ENSMUST00000180900 204 ntBASIC12.24□□□□□ -0.45
Prrt1O35449 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Prrt1O35449 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Prrt1O35449 Gm2420-202ENSMUST00000202224 2249 ntBASIC12.24□□□□□ -0.45
Prrt1O35449 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Prrt1O35449 AC164567.1-201ENSMUST00000219185 960 ntBASIC12.24□□□□□ -0.45
Prrt1O35449 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC12.24□□□□□ -0.45
Prrt1O35449 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Prrt1O35449 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC12.24□□□□□ -0.45
Prrt1O35449 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Prrt1O35449 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Prrt1O35449 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Prrt1O35449 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Prrt1O35449 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Prrt1O35449 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Prrt1O35449 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Prrt1O35449 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Prrt1O35449 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Prrt1O35449 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Prrt1O35449 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Prrt1O35449 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Prrt1O35449 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Prrt1O35449 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Prrt1O35449 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.23□□□□□ -0.45
Prrt1O35449 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Prrt1O35449 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Prrt1O35449 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Prrt1O35449 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Prrt1O35449 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC12.23□□□□□ -0.45
Prrt1O35449 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Prrt1O35449 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC12.23□□□□□ -0.45
Prrt1O35449 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC12.23□□□□□ -0.45
Prrt1O35449 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC12.23□□□□□ -0.45
Prrt1O35449 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC12.23□□□□□ -0.45
Prrt1O35449 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Prrt1O35449 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Prrt1O35449 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Prrt1O35449 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Prrt1O35449 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Prrt1O35449 Gm43570-201ENSMUST00000199951 3688 ntBASIC12.23□□□□□ -0.45
Prrt1O35449 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Prrt1O35449 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Prrt1O35449 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Prrt1O35449 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Prrt1O35449 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Prrt1O35449 Gm9947-201ENSMUST00000067599 2920 ntBASIC12.23□□□□□ -0.45
Prrt1O35449 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Prrt1O35449 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Prrt1O35449 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Prrt1O35449 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Prrt1O35449 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Prrt1O35449 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Prrt1O35449 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Prrt1O35449 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Prrt1O35449 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Prrt1O35449 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Prrt1O35449 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Prrt1O35449 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Prrt1O35449 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Prrt1O35449 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Prrt1O35449 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Prrt1O35449 Ankra2-208ENSMUST00000226100 1476 ntBASIC12.22□□□□□ -0.45
Prrt1O35449 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Prrt1O35449 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Prrt1O35449 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Prrt1O35449 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Prrt1O35449 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Prrt1O35449 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms