Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cx3cl1O35188 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cx3cl1O35188 Gm42934-201ENSMUST00000196920 1345 ntBASIC13.63□□□□□ -0.23
Cx3cl1O35188 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
Cx3cl1O35188 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cx3cl1O35188 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC13.63□□□□□ -0.23
Cx3cl1O35188 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cx3cl1O35188 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cx3cl1O35188 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cx3cl1O35188 CT025626.1-201ENSMUST00000223735 1455 ntBASIC13.62□□□□□ -0.23
Cx3cl1O35188 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cx3cl1O35188 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cx3cl1O35188 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cx3cl1O35188 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cx3cl1O35188 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Cx3cl1O35188 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cx3cl1O35188 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cx3cl1O35188 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cx3cl1O35188 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC13.62□□□□□ -0.23
Cx3cl1O35188 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cx3cl1O35188 AC131710.1-201ENSMUST00000228336 990 ntBASIC13.62□□□□□ -0.23
Cx3cl1O35188 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cx3cl1O35188 Gm8396-201ENSMUST00000057361 823 ntBASIC13.62□□□□□ -0.23
Cx3cl1O35188 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Cx3cl1O35188 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cx3cl1O35188 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC13.62□□□□□ -0.23
Cx3cl1O35188 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cx3cl1O35188 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
Cx3cl1O35188 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cx3cl1O35188 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cx3cl1O35188 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cx3cl1O35188 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cx3cl1O35188 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cx3cl1O35188 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cx3cl1O35188 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cx3cl1O35188 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cx3cl1O35188 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cx3cl1O35188 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cx3cl1O35188 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cx3cl1O35188 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cx3cl1O35188 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cx3cl1O35188 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cx3cl1O35188 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC13.61□□□□□ -0.23
Cx3cl1O35188 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cx3cl1O35188 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cx3cl1O35188 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cx3cl1O35188 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cx3cl1O35188 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Cx3cl1O35188 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cx3cl1O35188 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cx3cl1O35188 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cx3cl1O35188 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cx3cl1O35188 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cx3cl1O35188 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cx3cl1O35188 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cx3cl1O35188 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cx3cl1O35188 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC13.61□□□□□ -0.23
Cx3cl1O35188 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cx3cl1O35188 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC13.61□□□□□ -0.23
Cx3cl1O35188 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC13.61□□□□□ -0.23
Cx3cl1O35188 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC13.61□□□□□ -0.23
Cx3cl1O35188 Gm38225-201ENSMUST00000194001 393 ntBASIC13.61□□□□□ -0.23
Cx3cl1O35188 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cx3cl1O35188 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cx3cl1O35188 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cx3cl1O35188 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cx3cl1O35188 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cx3cl1O35188 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cx3cl1O35188 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cx3cl1O35188 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Cx3cl1O35188 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC13.61□□□□□ -0.23
Cx3cl1O35188 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cx3cl1O35188 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC13.61□□□□□ -0.23
Cx3cl1O35188 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC13.61□□□□□ -0.23
Cx3cl1O35188 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Cx3cl1O35188 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cx3cl1O35188 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cx3cl1O35188 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cx3cl1O35188 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC13.6□□□□□ -0.23
Cx3cl1O35188 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cx3cl1O35188 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cx3cl1O35188 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cx3cl1O35188 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cx3cl1O35188 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cx3cl1O35188 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cx3cl1O35188 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cx3cl1O35188 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cx3cl1O35188 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC13.6□□□□□ -0.23
Cx3cl1O35188 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cx3cl1O35188 Gm25287-201ENSMUST00000103846 110 ntBASIC13.6□□□□□ -0.23
Cx3cl1O35188 Gm22918-201ENSMUST00000103855 110 ntBASIC13.6□□□□□ -0.23
Cx3cl1O35188 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Cx3cl1O35188 Gm14701-201ENSMUST00000117156 348 ntBASIC13.6□□□□□ -0.23
Cx3cl1O35188 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Cx3cl1O35188 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC13.6□□□□□ -0.23
Cx3cl1O35188 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC13.6□□□□□ -0.23
Cx3cl1O35188 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cx3cl1O35188 Gm37912-201ENSMUST00000191895 3076 ntBASIC13.6□□□□□ -0.23
Cx3cl1O35188 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cx3cl1O35188 Gm5312-201ENSMUST00000203728 547 ntBASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms