Protein–RNA interactions for Protein: L7N2C4

Gm4340, Predicted gene 4340, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm4340L7N2C4 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Gm4340L7N2C4 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm4340L7N2C4 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Gm4340L7N2C4 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Gm4340L7N2C4 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm4340L7N2C4 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm4340L7N2C4 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm4340L7N2C4 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm4340L7N2C4 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm4340L7N2C4 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC17.24■□□□□ 0.35
Gm4340L7N2C4 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm4340L7N2C4 Gm29340-201ENSMUST00000188763 3854 ntBASIC17.23■□□□□ 0.35
Gm4340L7N2C4 AC154231.1-201ENSMUST00000220564 2175 ntBASIC17.23■□□□□ 0.35
Gm4340L7N2C4 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Gm4340L7N2C4 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm4340L7N2C4 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm4340L7N2C4 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Gm4340L7N2C4 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm4340L7N2C4 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm4340L7N2C4 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Gm4340L7N2C4 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm4340L7N2C4 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm4340L7N2C4 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Gm4340L7N2C4 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Gm4340L7N2C4 Gm15393-201ENSMUST00000120499 219 ntBASIC17.23■□□□□ 0.35
Gm4340L7N2C4 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC17.23■□□□□ 0.35
Gm4340L7N2C4 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC17.23■□□□□ 0.35
Gm4340L7N2C4 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC17.23■□□□□ 0.35
Gm4340L7N2C4 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Gm4340L7N2C4 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Gm4340L7N2C4 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC17.23■□□□□ 0.35
Gm4340L7N2C4 Gm42612-201ENSMUST00000197986 623 ntBASIC17.23■□□□□ 0.35
Gm4340L7N2C4 AC153872.1-201ENSMUST00000199539 128 ntBASIC17.23■□□□□ 0.35
Gm4340L7N2C4 Gm43170-201ENSMUST00000199827 612 ntBASIC17.23■□□□□ 0.35
Gm4340L7N2C4 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Gm4340L7N2C4 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm4340L7N2C4 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm4340L7N2C4 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC17.23■□□□□ 0.35
Gm4340L7N2C4 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm4340L7N2C4 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm4340L7N2C4 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm4340L7N2C4 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm4340L7N2C4 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm4340L7N2C4 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm4340L7N2C4 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm4340L7N2C4 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm4340L7N2C4 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm4340L7N2C4 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm4340L7N2C4 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm4340L7N2C4 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm4340L7N2C4 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm4340L7N2C4 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Gm4340L7N2C4 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Gm4340L7N2C4 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Gm4340L7N2C4 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
Gm4340L7N2C4 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm4340L7N2C4 Gm12859-201ENSMUST00000117834 427 ntBASIC17.22■□□□□ 0.35
Gm4340L7N2C4 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Gm4340L7N2C4 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC17.22■□□□□ 0.35
Gm4340L7N2C4 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Gm4340L7N2C4 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm4340L7N2C4 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC17.22■□□□□ 0.35
Gm4340L7N2C4 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm4340L7N2C4 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm4340L7N2C4 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm4340L7N2C4 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm4340L7N2C4 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Gm4340L7N2C4 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC17.21■□□□□ 0.35
Gm4340L7N2C4 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm4340L7N2C4 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm4340L7N2C4 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm4340L7N2C4 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC17.21■□□□□ 0.35
Gm4340L7N2C4 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Gm4340L7N2C4 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm4340L7N2C4 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm4340L7N2C4 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC17.21■□□□□ 0.35
Gm4340L7N2C4 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm4340L7N2C4 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm4340L7N2C4 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Gm4340L7N2C4 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Gm4340L7N2C4 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC17.21■□□□□ 0.35
Gm4340L7N2C4 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm4340L7N2C4 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC17.21■□□□□ 0.35
Gm4340L7N2C4 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Gm4340L7N2C4 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC17.21■□□□□ 0.35
Gm4340L7N2C4 AC154846.1-201ENSMUST00000226278 862 ntBASIC17.21■□□□□ 0.35
Gm4340L7N2C4 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC17.21■□□□□ 0.35
Gm4340L7N2C4 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm4340L7N2C4 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Gm4340L7N2C4 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC17.21■□□□□ 0.35
Gm4340L7N2C4 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm4340L7N2C4 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC17.21■□□□□ 0.35
Gm4340L7N2C4 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC17.21■□□□□ 0.35
Gm4340L7N2C4 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm4340L7N2C4 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Gm4340L7N2C4 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm4340L7N2C4 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Gm4340L7N2C4 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
Gm4340L7N2C4 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm4340L7N2C4 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms