Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim55G3X8Y1 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim55G3X8Y1 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim55G3X8Y1 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim55G3X8Y1 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim55G3X8Y1 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim55G3X8Y1 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim55G3X8Y1 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC14.91□□□□□ -0.02
Trim55G3X8Y1 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Trim55G3X8Y1 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC14.91□□□□□ -0.02
Trim55G3X8Y1 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC14.91□□□□□ -0.02
Trim55G3X8Y1 Gm18041-201ENSMUST00000218210 618 ntBASIC14.91□□□□□ -0.02
Trim55G3X8Y1 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim55G3X8Y1 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim55G3X8Y1 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC14.91□□□□□ -0.02
Trim55G3X8Y1 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trim55G3X8Y1 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trim55G3X8Y1 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trim55G3X8Y1 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim55G3X8Y1 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim55G3X8Y1 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Trim55G3X8Y1 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trim55G3X8Y1 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
Trim55G3X8Y1 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim55G3X8Y1 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Trim55G3X8Y1 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trim55G3X8Y1 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trim55G3X8Y1 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Trim55G3X8Y1 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
Trim55G3X8Y1 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim55G3X8Y1 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim55G3X8Y1 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim55G3X8Y1 Prkcz2-201ENSMUST00000206136 1756 ntBASIC14.9□□□□□ -0.02
Trim55G3X8Y1 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim55G3X8Y1 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trim55G3X8Y1 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim55G3X8Y1 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim55G3X8Y1 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim55G3X8Y1 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC14.9□□□□□ -0.02
Trim55G3X8Y1 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim55G3X8Y1 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim55G3X8Y1 Gm42632-201ENSMUST00000201707 2411 ntBASIC14.9□□□□□ -0.02
Trim55G3X8Y1 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim55G3X8Y1 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Trim55G3X8Y1 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC14.9□□□□□ -0.02
Trim55G3X8Y1 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC14.9□□□□□ -0.02
Trim55G3X8Y1 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
Trim55G3X8Y1 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim55G3X8Y1 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim55G3X8Y1 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim55G3X8Y1 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim55G3X8Y1 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
Trim55G3X8Y1 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trim55G3X8Y1 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC14.9□□□□□ -0.02
Trim55G3X8Y1 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
Trim55G3X8Y1 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC14.9□□□□□ -0.02
Trim55G3X8Y1 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Trim55G3X8Y1 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim55G3X8Y1 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trim55G3X8Y1 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim55G3X8Y1 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim55G3X8Y1 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
Trim55G3X8Y1 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trim55G3X8Y1 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
Trim55G3X8Y1 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim55G3X8Y1 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim55G3X8Y1 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim55G3X8Y1 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim55G3X8Y1 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim55G3X8Y1 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim55G3X8Y1 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trim55G3X8Y1 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim55G3X8Y1 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC14.89□□□□□ -0.03
Trim55G3X8Y1 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC14.89□□□□□ -0.03
Trim55G3X8Y1 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Trim55G3X8Y1 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim55G3X8Y1 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim55G3X8Y1 Mmp14-206ENSMUST00000225641 3238 ntBASIC14.89□□□□□ -0.03
Trim55G3X8Y1 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim55G3X8Y1 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trim55G3X8Y1 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim55G3X8Y1 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim55G3X8Y1 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim55G3X8Y1 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim55G3X8Y1 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim55G3X8Y1 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim55G3X8Y1 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
Trim55G3X8Y1 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim55G3X8Y1 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trim55G3X8Y1 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim55G3X8Y1 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim55G3X8Y1 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trim55G3X8Y1 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Trim55G3X8Y1 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim55G3X8Y1 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim55G3X8Y1 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim55G3X8Y1 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim55G3X8Y1 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim55G3X8Y1 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trim55G3X8Y1 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC14.88□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms