Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Pcdh9F8VPK8 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdh9F8VPK8 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC14.86□□□□□ -0.03
Pcdh9F8VPK8 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC14.86□□□□□ -0.03
Pcdh9F8VPK8 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdh9F8VPK8 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdh9F8VPK8 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
Pcdh9F8VPK8 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdh9F8VPK8 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdh9F8VPK8 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdh9F8VPK8 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdh9F8VPK8 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdh9F8VPK8 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Pcdh9F8VPK8 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdh9F8VPK8 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Pcdh9F8VPK8 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdh9F8VPK8 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdh9F8VPK8 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdh9F8VPK8 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdh9F8VPK8 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdh9F8VPK8 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.85□□□□□ -0.03
Pcdh9F8VPK8 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdh9F8VPK8 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdh9F8VPK8 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdh9F8VPK8 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdh9F8VPK8 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdh9F8VPK8 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC14.85□□□□□ -0.03
Pcdh9F8VPK8 Gm5177-201ENSMUST00000183092 997 ntBASIC14.85□□□□□ -0.03
Pcdh9F8VPK8 Mir7036b-201ENSMUST00000184791 63 ntBASIC14.85□□□□□ -0.03
Pcdh9F8VPK8 Gm44771-201ENSMUST00000206975 626 ntBASIC14.85□□□□□ -0.03
Pcdh9F8VPK8 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdh9F8VPK8 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdh9F8VPK8 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
Pcdh9F8VPK8 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdh9F8VPK8 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdh9F8VPK8 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdh9F8VPK8 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Pcdh9F8VPK8 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdh9F8VPK8 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdh9F8VPK8 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Pcdh9F8VPK8 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdh9F8VPK8 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh9F8VPK8 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh9F8VPK8 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh9F8VPK8 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh9F8VPK8 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh9F8VPK8 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh9F8VPK8 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Pcdh9F8VPK8 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh9F8VPK8 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh9F8VPK8 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Pcdh9F8VPK8 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh9F8VPK8 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh9F8VPK8 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh9F8VPK8 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh9F8VPK8 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC14.84□□□□□ -0.03
Pcdh9F8VPK8 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh9F8VPK8 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Pcdh9F8VPK8 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Pcdh9F8VPK8 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh9F8VPK8 Gm37230-201ENSMUST00000194491 818 ntBASIC14.84□□□□□ -0.03
Pcdh9F8VPK8 Gm5364-201ENSMUST00000216789 889 ntBASIC14.84□□□□□ -0.03
Pcdh9F8VPK8 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC14.84□□□□□ -0.03
Pcdh9F8VPK8 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh9F8VPK8 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh9F8VPK8 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh9F8VPK8 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC14.84□□□□□ -0.03
Pcdh9F8VPK8 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh9F8VPK8 Gm38042-201ENSMUST00000191614 5208 ntBASIC14.84□□□□□ -0.03
Pcdh9F8VPK8 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh9F8VPK8 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh9F8VPK8 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh9F8VPK8 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
Pcdh9F8VPK8 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Pcdh9F8VPK8 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Pcdh9F8VPK8 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
Pcdh9F8VPK8 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Pcdh9F8VPK8 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.83□□□□□ -0.03
Pcdh9F8VPK8 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
Pcdh9F8VPK8 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdh9F8VPK8 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdh9F8VPK8 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdh9F8VPK8 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdh9F8VPK8 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdh9F8VPK8 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Pcdh9F8VPK8 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdh9F8VPK8 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Pcdh9F8VPK8 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdh9F8VPK8 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdh9F8VPK8 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdh9F8VPK8 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdh9F8VPK8 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC14.83□□□□□ -0.04
Pcdh9F8VPK8 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC14.83□□□□□ -0.04
Pcdh9F8VPK8 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC14.83□□□□□ -0.04
Pcdh9F8VPK8 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC14.83□□□□□ -0.04
Pcdh9F8VPK8 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC14.83□□□□□ -0.04
Pcdh9F8VPK8 Gm18206-201ENSMUST00000207027 926 ntBASIC14.83□□□□□ -0.04
Pcdh9F8VPK8 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdh9F8VPK8 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdh9F8VPK8 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms