Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav12d-1A0N8R0 Gm2451-201ENSMUST00000199447 999 ntBASIC11.67□□□□□ -0.54
Trav12d-1A0N8R0 Gm10290-201ENSMUST00000200451 999 ntBASIC11.67□□□□□ -0.54
Trav12d-1A0N8R0 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC11.67□□□□□ -0.54
Trav12d-1A0N8R0 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav12d-1A0N8R0 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav12d-1A0N8R0 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav12d-1A0N8R0 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav12d-1A0N8R0 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav12d-1A0N8R0 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC11.67□□□□□ -0.54
Trav12d-1A0N8R0 Gm10710-201ENSMUST00000047876 3971 ntBASIC11.67□□□□□ -0.54
Trav12d-1A0N8R0 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav12d-1A0N8R0 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav12d-1A0N8R0 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC11.67□□□□□ -0.54
Trav12d-1A0N8R0 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav12d-1A0N8R0 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav12d-1A0N8R0 CT030684.3-201ENSMUST00000227308 2445 ntBASIC11.67□□□□□ -0.54
Trav12d-1A0N8R0 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav12d-1A0N8R0 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Trav12d-1A0N8R0 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav12d-1A0N8R0 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav12d-1A0N8R0 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav12d-1A0N8R0 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Trav12d-1A0N8R0 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC11.66□□□□□ -0.54
Trav12d-1A0N8R0 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
Trav12d-1A0N8R0 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav12d-1A0N8R0 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav12d-1A0N8R0 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav12d-1A0N8R0 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav12d-1A0N8R0 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav12d-1A0N8R0 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Trav12d-1A0N8R0 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav12d-1A0N8R0 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav12d-1A0N8R0 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC11.66□□□□□ -0.54
Trav12d-1A0N8R0 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC11.66□□□□□ -0.54
Trav12d-1A0N8R0 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC11.66□□□□□ -0.54
Trav12d-1A0N8R0 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav12d-1A0N8R0 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav12d-1A0N8R0 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav12d-1A0N8R0 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav12d-1A0N8R0 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav12d-1A0N8R0 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Trav12d-1A0N8R0 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC11.66□□□□□ -0.54
Trav12d-1A0N8R0 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav12d-1A0N8R0 Gm43935-201ENSMUST00000203569 1050 ntBASIC11.66□□□□□ -0.54
Trav12d-1A0N8R0 Gm45167-201ENSMUST00000208007 322 ntBASIC11.66□□□□□ -0.54
Trav12d-1A0N8R0 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav12d-1A0N8R0 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav12d-1A0N8R0 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav12d-1A0N8R0 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav12d-1A0N8R0 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav12d-1A0N8R0 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav12d-1A0N8R0 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav12d-1A0N8R0 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav12d-1A0N8R0 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC11.66□□□□□ -0.54
Trav12d-1A0N8R0 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav12d-1A0N8R0 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC11.66□□□□□ -0.54
Trav12d-1A0N8R0 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav12d-1A0N8R0 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav12d-1A0N8R0 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC11.66□□□□□ -0.54
Trav12d-1A0N8R0 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav12d-1A0N8R0 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav12d-1A0N8R0 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav12d-1A0N8R0 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav12d-1A0N8R0 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Trav12d-1A0N8R0 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav12d-1A0N8R0 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav12d-1A0N8R0 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC11.65□□□□□ -0.54
Trav12d-1A0N8R0 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav12d-1A0N8R0 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav12d-1A0N8R0 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Trav12d-1A0N8R0 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav12d-1A0N8R0 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Trav12d-1A0N8R0 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav12d-1A0N8R0 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav12d-1A0N8R0 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav12d-1A0N8R0 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Trav12d-1A0N8R0 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav12d-1A0N8R0 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav12d-1A0N8R0 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
Trav12d-1A0N8R0 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Trav12d-1A0N8R0 Gm7230-201ENSMUST00000173026 815 ntBASIC11.65□□□□□ -0.54
Trav12d-1A0N8R0 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC11.65□□□□□ -0.54
Trav12d-1A0N8R0 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC11.65□□□□□ -0.54
Trav12d-1A0N8R0 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav12d-1A0N8R0 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav12d-1A0N8R0 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC11.65□□□□□ -0.54
Trav12d-1A0N8R0 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav12d-1A0N8R0 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav12d-1A0N8R0 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav12d-1A0N8R0 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav12d-1A0N8R0 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Trav12d-1A0N8R0 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav12d-1A0N8R0 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav12d-1A0N8R0 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav12d-1A0N8R0 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Trav12d-1A0N8R0 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC11.65□□□□□ -0.54
Trav12d-1A0N8R0 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav12d-1A0N8R0 Gm18856-201ENSMUST00000178096 1374 ntBASIC11.65□□□□□ -0.55
Trav12d-1A0N8R0 Gm42872-201ENSMUST00000200026 1967 ntBASIC11.65□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms