Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav18A0A075B656 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Trav18A0A075B656 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav18A0A075B656 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav18A0A075B656 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav18A0A075B656 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav18A0A075B656 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav18A0A075B656 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav18A0A075B656 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav18A0A075B656 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav18A0A075B656 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav18A0A075B656 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav18A0A075B656 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav18A0A075B656 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav18A0A075B656 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav18A0A075B656 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav18A0A075B656 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav18A0A075B656 Gm28182-201ENSMUST00000188354 2477 ntBASIC11.88□□□□□ -0.51
Trav18A0A075B656 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC11.88□□□□□ -0.51
Trav18A0A075B656 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav18A0A075B656 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav18A0A075B656 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav18A0A075B656 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav18A0A075B656 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav18A0A075B656 AC126250.1-201ENSMUST00000228343 1768 ntBASIC11.88□□□□□ -0.51
Trav18A0A075B656 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC11.88□□□□□ -0.51
Trav18A0A075B656 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC11.88□□□□□ -0.51
Trav18A0A075B656 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav18A0A075B656 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav18A0A075B656 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC11.88□□□□□ -0.51
Trav18A0A075B656 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav18A0A075B656 AC155729.1-201ENSMUST00000227758 544 ntBASIC11.88□□□□□ -0.51
Trav18A0A075B656 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav18A0A075B656 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav18A0A075B656 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav18A0A075B656 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav18A0A075B656 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Trav18A0A075B656 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC11.88□□□□□ -0.51
Trav18A0A075B656 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav18A0A075B656 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav18A0A075B656 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav18A0A075B656 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav18A0A075B656 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav18A0A075B656 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav18A0A075B656 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav18A0A075B656 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav18A0A075B656 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav18A0A075B656 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Trav18A0A075B656 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Trav18A0A075B656 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav18A0A075B656 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav18A0A075B656 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav18A0A075B656 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav18A0A075B656 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav18A0A075B656 Gm11873-201ENSMUST00000117877 1304 ntBASIC11.87□□□□□ -0.51
Trav18A0A075B656 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav18A0A075B656 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav18A0A075B656 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav18A0A075B656 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav18A0A075B656 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC11.87□□□□□ -0.51
Trav18A0A075B656 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav18A0A075B656 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav18A0A075B656 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav18A0A075B656 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav18A0A075B656 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav18A0A075B656 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Trav18A0A075B656 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav18A0A075B656 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC11.87□□□□□ -0.51
Trav18A0A075B656 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav18A0A075B656 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav18A0A075B656 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Trav18A0A075B656 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav18A0A075B656 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Trav18A0A075B656 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav18A0A075B656 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav18A0A075B656 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav18A0A075B656 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav18A0A075B656 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC11.87□□□□□ -0.51
Trav18A0A075B656 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav18A0A075B656 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Trav18A0A075B656 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Trav18A0A075B656 Mir5126-201ENSMUST00000175513 77 ntBASIC11.87□□□□□ -0.51
Trav18A0A075B656 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav18A0A075B656 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC11.87□□□□□ -0.51
Trav18A0A075B656 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav18A0A075B656 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC11.87□□□□□ -0.51
Trav18A0A075B656 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC11.87□□□□□ -0.51
Trav18A0A075B656 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav18A0A075B656 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC11.87□□□□□ -0.51
Trav18A0A075B656 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav18A0A075B656 AC159649.2-201ENSMUST00000222984 3223 ntBASIC11.87□□□□□ -0.51
Trav18A0A075B656 Mmp14-206ENSMUST00000225641 3238 ntBASIC11.87□□□□□ -0.51
Trav18A0A075B656 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Trav18A0A075B656 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav18A0A075B656 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav18A0A075B656 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav18A0A075B656 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC11.86□□□□□ -0.51
Trav18A0A075B656 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav18A0A075B656 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Trav18A0A075B656 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 70.4 ms