Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav8-1A0A075B641 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav8-1A0A075B641 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Trav8-1A0A075B641 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav8-1A0A075B641 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav8-1A0A075B641 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Trav8-1A0A075B641 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Trav8-1A0A075B641 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav8-1A0A075B641 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Trav8-1A0A075B641 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav8-1A0A075B641 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav8-1A0A075B641 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav8-1A0A075B641 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Trav8-1A0A075B641 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC10.4□□□□□ -0.74
Trav8-1A0A075B641 Gm13436-201ENSMUST00000120418 567 ntBASIC10.4□□□□□ -0.74
Trav8-1A0A075B641 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav8-1A0A075B641 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC10.4□□□□□ -0.74
Trav8-1A0A075B641 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC10.4□□□□□ -0.74
Trav8-1A0A075B641 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC10.4□□□□□ -0.74
Trav8-1A0A075B641 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC10.4□□□□□ -0.74
Trav8-1A0A075B641 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC10.4□□□□□ -0.74
Trav8-1A0A075B641 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC10.4□□□□□ -0.74
Trav8-1A0A075B641 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav8-1A0A075B641 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav8-1A0A075B641 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav8-1A0A075B641 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav8-1A0A075B641 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav8-1A0A075B641 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav8-1A0A075B641 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav8-1A0A075B641 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Trav8-1A0A075B641 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav8-1A0A075B641 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC10.4□□□□□ -0.74
Trav8-1A0A075B641 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav8-1A0A075B641 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Trav8-1A0A075B641 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC10.4□□□□□ -0.74
Trav8-1A0A075B641 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav8-1A0A075B641 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC10.4□□□□□ -0.75
Trav8-1A0A075B641 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Trav8-1A0A075B641 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.75
Trav8-1A0A075B641 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC10.4□□□□□ -0.75
Trav8-1A0A075B641 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Trav8-1A0A075B641 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.75
Trav8-1A0A075B641 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav8-1A0A075B641 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trav8-1A0A075B641 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav8-1A0A075B641 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC10.39□□□□□ -0.75
Trav8-1A0A075B641 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav8-1A0A075B641 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trav8-1A0A075B641 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav8-1A0A075B641 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav8-1A0A075B641 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC10.39□□□□□ -0.75
Trav8-1A0A075B641 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav8-1A0A075B641 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav8-1A0A075B641 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav8-1A0A075B641 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Trav8-1A0A075B641 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Trav8-1A0A075B641 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav8-1A0A075B641 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Trav8-1A0A075B641 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav8-1A0A075B641 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav8-1A0A075B641 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC10.39□□□□□ -0.75
Trav8-1A0A075B641 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trav8-1A0A075B641 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC10.39□□□□□ -0.75
Trav8-1A0A075B641 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
Trav8-1A0A075B641 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav8-1A0A075B641 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC10.39□□□□□ -0.75
Trav8-1A0A075B641 AC160980.1-201ENSMUST00000224136 970 ntBASIC10.39□□□□□ -0.75
Trav8-1A0A075B641 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav8-1A0A075B641 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav8-1A0A075B641 Gm38346-201ENSMUST00000192379 2639 ntBASIC10.39□□□□□ -0.75
Trav8-1A0A075B641 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav8-1A0A075B641 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trav8-1A0A075B641 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav8-1A0A075B641 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav8-1A0A075B641 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trav8-1A0A075B641 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav8-1A0A075B641 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav8-1A0A075B641 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav8-1A0A075B641 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav8-1A0A075B641 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav8-1A0A075B641 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav8-1A0A075B641 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav8-1A0A075B641 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC10.39□□□□□ -0.75
Trav8-1A0A075B641 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav8-1A0A075B641 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trav8-1A0A075B641 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav8-1A0A075B641 Grk6-205ENSMUST00000224653 2976 ntBASIC10.38□□□□□ -0.75
Trav8-1A0A075B641 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav8-1A0A075B641 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC10.38□□□□□ -0.75
Trav8-1A0A075B641 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav8-1A0A075B641 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trav8-1A0A075B641 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC10.38□□□□□ -0.75
Trav8-1A0A075B641 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav8-1A0A075B641 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav8-1A0A075B641 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav8-1A0A075B641 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trav8-1A0A075B641 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav8-1A0A075B641 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav8-1A0A075B641 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC10.38□□□□□ -0.75
Trav8-1A0A075B641 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC10.38□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms