Protein–RNA interactions for Protein: A0A075B604

Trav7n-5, T cell receptor alpha variable 7D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-5A0A075B604 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav7n-5A0A075B604 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC11.89□□□□□ -0.51
Trav7n-5A0A075B604 Gm13517-201ENSMUST00000120782 1495 ntBASIC11.89□□□□□ -0.51
Trav7n-5A0A075B604 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav7n-5A0A075B604 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav7n-5A0A075B604 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav7n-5A0A075B604 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav7n-5A0A075B604 Fgf17-202ENSMUST00000227123 1336 ntBASIC11.88□□□□□ -0.51
Trav7n-5A0A075B604 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Trav7n-5A0A075B604 Carlr-201ENSMUST00000181515 2574 ntBASIC11.88□□□□□ -0.51
Trav7n-5A0A075B604 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav7n-5A0A075B604 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav7n-5A0A075B604 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Trav7n-5A0A075B604 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav7n-5A0A075B604 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav7n-5A0A075B604 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav7n-5A0A075B604 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav7n-5A0A075B604 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav7n-5A0A075B604 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav7n-5A0A075B604 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav7n-5A0A075B604 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav7n-5A0A075B604 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav7n-5A0A075B604 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
Trav7n-5A0A075B604 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav7n-5A0A075B604 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav7n-5A0A075B604 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav7n-5A0A075B604 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC11.88□□□□□ -0.51
Trav7n-5A0A075B604 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC11.88□□□□□ -0.51
Trav7n-5A0A075B604 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav7n-5A0A075B604 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Trav7n-5A0A075B604 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Trav7n-5A0A075B604 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC11.88□□□□□ -0.51
Trav7n-5A0A075B604 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav7n-5A0A075B604 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav7n-5A0A075B604 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Trav7n-5A0A075B604 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav7n-5A0A075B604 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav7n-5A0A075B604 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav7n-5A0A075B604 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC11.88□□□□□ -0.51
Trav7n-5A0A075B604 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav7n-5A0A075B604 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav7n-5A0A075B604 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav7n-5A0A075B604 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav7n-5A0A075B604 Ksr1-207ENSMUST00000226282 5260 ntBASIC11.88□□□□□ -0.51
Trav7n-5A0A075B604 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav7n-5A0A075B604 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Trav7n-5A0A075B604 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav7n-5A0A075B604 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav7n-5A0A075B604 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Trav7n-5A0A075B604 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav7n-5A0A075B604 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav7n-5A0A075B604 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav7n-5A0A075B604 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav7n-5A0A075B604 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav7n-5A0A075B604 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav7n-5A0A075B604 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav7n-5A0A075B604 Gm13015-201ENSMUST00000118674 204 ntBASIC11.87□□□□□ -0.51
Trav7n-5A0A075B604 Gm15920-201ENSMUST00000118998 402 ntBASIC11.87□□□□□ -0.51
Trav7n-5A0A075B604 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
Trav7n-5A0A075B604 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC11.87□□□□□ -0.51
Trav7n-5A0A075B604 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC11.87□□□□□ -0.51
Trav7n-5A0A075B604 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
Trav7n-5A0A075B604 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC11.87□□□□□ -0.51
Trav7n-5A0A075B604 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav7n-5A0A075B604 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav7n-5A0A075B604 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav7n-5A0A075B604 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav7n-5A0A075B604 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav7n-5A0A075B604 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav7n-5A0A075B604 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav7n-5A0A075B604 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav7n-5A0A075B604 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav7n-5A0A075B604 Fbxl12-205ENSMUST00000140702 1555 ntBASIC11.87□□□□□ -0.51
Trav7n-5A0A075B604 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav7n-5A0A075B604 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Trav7n-5A0A075B604 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav7n-5A0A075B604 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav7n-5A0A075B604 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav7n-5A0A075B604 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Trav7n-5A0A075B604 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Trav7n-5A0A075B604 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav7n-5A0A075B604 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav7n-5A0A075B604 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav7n-5A0A075B604 Gm16425-201ENSMUST00000118143 3130 ntBASIC11.86□□□□□ -0.51
Trav7n-5A0A075B604 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav7n-5A0A075B604 Gm9768-201ENSMUST00000206007 2861 ntBASIC11.86□□□□□ -0.51
Trav7n-5A0A075B604 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav7n-5A0A075B604 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav7n-5A0A075B604 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav7n-5A0A075B604 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav7n-5A0A075B604 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav7n-5A0A075B604 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav7n-5A0A075B604 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC11.86□□□□□ -0.51
Trav7n-5A0A075B604 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC11.86□□□□□ -0.51
Trav7n-5A0A075B604 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav7n-5A0A075B604 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav7n-5A0A075B604 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav7n-5A0A075B604 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Trav7n-5A0A075B604 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav7n-5A0A075B604 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms