Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
H2afb2S4R1M3 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
H2afb2S4R1M3 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
H2afb2S4R1M3 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
H2afb2S4R1M3 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
H2afb2S4R1M3 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC14.52□□□□□ -0.09
H2afb2S4R1M3 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC14.52□□□□□ -0.09
H2afb2S4R1M3 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC14.52□□□□□ -0.09
H2afb2S4R1M3 Gm27920-201ENSMUST00000183953 96 ntBASIC14.52□□□□□ -0.09
H2afb2S4R1M3 Gm5264-201ENSMUST00000190584 848 ntBASIC14.52□□□□□ -0.09
H2afb2S4R1M3 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC14.52□□□□□ -0.09
H2afb2S4R1M3 Klk2-ps-201ENSMUST00000205342 571 ntBASIC14.52□□□□□ -0.09
H2afb2S4R1M3 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
H2afb2S4R1M3 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
H2afb2S4R1M3 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
H2afb2S4R1M3 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
H2afb2S4R1M3 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
H2afb2S4R1M3 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC14.52□□□□□ -0.09
H2afb2S4R1M3 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
H2afb2S4R1M3 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
H2afb2S4R1M3 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
H2afb2S4R1M3 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
H2afb2S4R1M3 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
H2afb2S4R1M3 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
H2afb2S4R1M3 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
H2afb2S4R1M3 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
H2afb2S4R1M3 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
H2afb2S4R1M3 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC14.51□□□□□ -0.09
H2afb2S4R1M3 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
H2afb2S4R1M3 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC14.51□□□□□ -0.09
H2afb2S4R1M3 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
H2afb2S4R1M3 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
H2afb2S4R1M3 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
H2afb2S4R1M3 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
H2afb2S4R1M3 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
H2afb2S4R1M3 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
H2afb2S4R1M3 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
H2afb2S4R1M3 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
H2afb2S4R1M3 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
H2afb2S4R1M3 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
H2afb2S4R1M3 Gm6973-201ENSMUST00000117080 721 ntBASIC14.51□□□□□ -0.09
H2afb2S4R1M3 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC14.51□□□□□ -0.09
H2afb2S4R1M3 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
H2afb2S4R1M3 Gm11543-201ENSMUST00000120758 370 ntBASIC14.51□□□□□ -0.09
H2afb2S4R1M3 Gm11025-201ENSMUST00000140773 466 ntBASIC14.51□□□□□ -0.09
H2afb2S4R1M3 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC14.51□□□□□ -0.09
H2afb2S4R1M3 Gm8000-201ENSMUST00000188378 592 ntBASIC14.51□□□□□ -0.09
H2afb2S4R1M3 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC14.51□□□□□ -0.09
H2afb2S4R1M3 Gm37230-201ENSMUST00000194491 818 ntBASIC14.51□□□□□ -0.09
H2afb2S4R1M3 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC14.51□□□□□ -0.09
H2afb2S4R1M3 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
H2afb2S4R1M3 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
H2afb2S4R1M3 Gpr146-202ENSMUST00000053120 1040 ntBASIC14.51□□□□□ -0.09
H2afb2S4R1M3 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
H2afb2S4R1M3 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
H2afb2S4R1M3 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
H2afb2S4R1M3 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
H2afb2S4R1M3 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC14.51□□□□□ -0.09
H2afb2S4R1M3 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
H2afb2S4R1M3 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
H2afb2S4R1M3 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
H2afb2S4R1M3 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC14.51□□□□□ -0.09
H2afb2S4R1M3 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
H2afb2S4R1M3 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
H2afb2S4R1M3 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
H2afb2S4R1M3 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
H2afb2S4R1M3 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
H2afb2S4R1M3 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
H2afb2S4R1M3 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
H2afb2S4R1M3 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
H2afb2S4R1M3 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
H2afb2S4R1M3 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
H2afb2S4R1M3 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
H2afb2S4R1M3 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC14.5□□□□□ -0.09
H2afb2S4R1M3 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
H2afb2S4R1M3 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
H2afb2S4R1M3 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
H2afb2S4R1M3 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
H2afb2S4R1M3 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
H2afb2S4R1M3 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
H2afb2S4R1M3 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
H2afb2S4R1M3 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
H2afb2S4R1M3 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
H2afb2S4R1M3 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
H2afb2S4R1M3 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
H2afb2S4R1M3 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC14.5□□□□□ -0.09
H2afb2S4R1M3 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC14.5□□□□□ -0.09
H2afb2S4R1M3 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
H2afb2S4R1M3 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
H2afb2S4R1M3 Gm10175-201ENSMUST00000086013 645 ntBASIC14.5□□□□□ -0.09
H2afb2S4R1M3 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
H2afb2S4R1M3 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
H2afb2S4R1M3 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
H2afb2S4R1M3 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
H2afb2S4R1M3 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
H2afb2S4R1M3 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
H2afb2S4R1M3 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
H2afb2S4R1M3 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC14.5□□□□□ -0.09
H2afb2S4R1M3 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
H2afb2S4R1M3 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms