Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
ClcnkaQ9WUB7 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ClcnkaQ9WUB7 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ClcnkaQ9WUB7 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ClcnkaQ9WUB7 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ClcnkaQ9WUB7 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ClcnkaQ9WUB7 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
ClcnkaQ9WUB7 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC13.38□□□□□ -0.27
ClcnkaQ9WUB7 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
ClcnkaQ9WUB7 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
ClcnkaQ9WUB7 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ClcnkaQ9WUB7 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ClcnkaQ9WUB7 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ClcnkaQ9WUB7 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
ClcnkaQ9WUB7 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ClcnkaQ9WUB7 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
ClcnkaQ9WUB7 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ClcnkaQ9WUB7 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ClcnkaQ9WUB7 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC13.38□□□□□ -0.27
ClcnkaQ9WUB7 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC13.38□□□□□ -0.27
ClcnkaQ9WUB7 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC13.38□□□□□ -0.27
ClcnkaQ9WUB7 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ClcnkaQ9WUB7 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ClcnkaQ9WUB7 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ClcnkaQ9WUB7 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
ClcnkaQ9WUB7 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
ClcnkaQ9WUB7 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ClcnkaQ9WUB7 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
ClcnkaQ9WUB7 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
ClcnkaQ9WUB7 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ClcnkaQ9WUB7 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC13.38□□□□□ -0.27
ClcnkaQ9WUB7 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ClcnkaQ9WUB7 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ClcnkaQ9WUB7 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
ClcnkaQ9WUB7 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
ClcnkaQ9WUB7 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ClcnkaQ9WUB7 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ClcnkaQ9WUB7 Gm44645-201ENSMUST00000205492 1653 ntBASIC13.37□□□□□ -0.27
ClcnkaQ9WUB7 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ClcnkaQ9WUB7 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ClcnkaQ9WUB7 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
ClcnkaQ9WUB7 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
ClcnkaQ9WUB7 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
ClcnkaQ9WUB7 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ClcnkaQ9WUB7 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
ClcnkaQ9WUB7 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
ClcnkaQ9WUB7 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
ClcnkaQ9WUB7 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ClcnkaQ9WUB7 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC13.37□□□□□ -0.27
ClcnkaQ9WUB7 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ClcnkaQ9WUB7 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ClcnkaQ9WUB7 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ClcnkaQ9WUB7 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
ClcnkaQ9WUB7 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ClcnkaQ9WUB7 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
ClcnkaQ9WUB7 Gm15427-201ENSMUST00000117288 531 ntBASIC13.37□□□□□ -0.27
ClcnkaQ9WUB7 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC13.37□□□□□ -0.27
ClcnkaQ9WUB7 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC13.37□□□□□ -0.27
ClcnkaQ9WUB7 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC13.37□□□□□ -0.27
ClcnkaQ9WUB7 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
ClcnkaQ9WUB7 Gm10175-201ENSMUST00000086013 645 ntBASIC13.37□□□□□ -0.27
ClcnkaQ9WUB7 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ClcnkaQ9WUB7 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ClcnkaQ9WUB7 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ClcnkaQ9WUB7 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
ClcnkaQ9WUB7 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
ClcnkaQ9WUB7 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
ClcnkaQ9WUB7 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ClcnkaQ9WUB7 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ClcnkaQ9WUB7 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
ClcnkaQ9WUB7 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
ClcnkaQ9WUB7 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC13.37□□□□□ -0.27
ClcnkaQ9WUB7 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ClcnkaQ9WUB7 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ClcnkaQ9WUB7 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
ClcnkaQ9WUB7 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ClcnkaQ9WUB7 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
ClcnkaQ9WUB7 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
ClcnkaQ9WUB7 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ClcnkaQ9WUB7 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ClcnkaQ9WUB7 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
ClcnkaQ9WUB7 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
ClcnkaQ9WUB7 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
ClcnkaQ9WUB7 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ClcnkaQ9WUB7 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ClcnkaQ9WUB7 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
ClcnkaQ9WUB7 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
ClcnkaQ9WUB7 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
ClcnkaQ9WUB7 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ClcnkaQ9WUB7 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ClcnkaQ9WUB7 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC13.36□□□□□ -0.27
ClcnkaQ9WUB7 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
ClcnkaQ9WUB7 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC13.36□□□□□ -0.27
ClcnkaQ9WUB7 Gm6226-201ENSMUST00000117765 1146 ntBASIC13.36□□□□□ -0.27
ClcnkaQ9WUB7 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
ClcnkaQ9WUB7 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC13.36□□□□□ -0.27
ClcnkaQ9WUB7 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC13.36□□□□□ -0.27
ClcnkaQ9WUB7 CT025555.1-201ENSMUST00000225901 1217 ntBASIC13.36□□□□□ -0.27
ClcnkaQ9WUB7 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ClcnkaQ9WUB7 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms