Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trim3Q9R1R2 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC13.68□□□□□ -0.22
Trim3Q9R1R2 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim3Q9R1R2 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim3Q9R1R2 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Trim3Q9R1R2 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim3Q9R1R2 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Trim3Q9R1R2 Gm43509-201ENSMUST00000196551 2594 ntBASIC13.68□□□□□ -0.22
Trim3Q9R1R2 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim3Q9R1R2 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC13.67□□□□□ -0.22
Trim3Q9R1R2 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trim3Q9R1R2 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Trim3Q9R1R2 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim3Q9R1R2 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim3Q9R1R2 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim3Q9R1R2 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim3Q9R1R2 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Trim3Q9R1R2 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim3Q9R1R2 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC13.67□□□□□ -0.22
Trim3Q9R1R2 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
Trim3Q9R1R2 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC13.67□□□□□ -0.22
Trim3Q9R1R2 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Trim3Q9R1R2 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trim3Q9R1R2 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
Trim3Q9R1R2 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim3Q9R1R2 Gm10313-201ENSMUST00000095320 1002 ntBASIC13.67□□□□□ -0.22
Trim3Q9R1R2 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC13.67□□□□□ -0.22
Trim3Q9R1R2 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim3Q9R1R2 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim3Q9R1R2 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Trim3Q9R1R2 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim3Q9R1R2 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Trim3Q9R1R2 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim3Q9R1R2 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim3Q9R1R2 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Trim3Q9R1R2 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim3Q9R1R2 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim3Q9R1R2 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trim3Q9R1R2 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC13.67□□□□□ -0.22
Trim3Q9R1R2 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim3Q9R1R2 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim3Q9R1R2 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim3Q9R1R2 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim3Q9R1R2 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim3Q9R1R2 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trim3Q9R1R2 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim3Q9R1R2 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC13.67□□□□□ -0.22
Trim3Q9R1R2 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC13.67□□□□□ -0.22
Trim3Q9R1R2 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim3Q9R1R2 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC13.67□□□□□ -0.22
Trim3Q9R1R2 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Trim3Q9R1R2 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim3Q9R1R2 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trim3Q9R1R2 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim3Q9R1R2 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC13.66□□□□□ -0.22
Trim3Q9R1R2 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim3Q9R1R2 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim3Q9R1R2 Gm21009-201ENSMUST00000197169 1669 ntBASIC13.66□□□□□ -0.22
Trim3Q9R1R2 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Trim3Q9R1R2 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Trim3Q9R1R2 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trim3Q9R1R2 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Trim3Q9R1R2 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim3Q9R1R2 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trim3Q9R1R2 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC13.66□□□□□ -0.22
Trim3Q9R1R2 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC13.66□□□□□ -0.22
Trim3Q9R1R2 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Trim3Q9R1R2 Gm15427-201ENSMUST00000117288 531 ntBASIC13.66□□□□□ -0.22
Trim3Q9R1R2 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC13.66□□□□□ -0.22
Trim3Q9R1R2 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC13.66□□□□□ -0.22
Trim3Q9R1R2 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Trim3Q9R1R2 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim3Q9R1R2 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Trim3Q9R1R2 Gm43575-201ENSMUST00000196420 516 ntBASIC13.66□□□□□ -0.22
Trim3Q9R1R2 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC13.66□□□□□ -0.22
Trim3Q9R1R2 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Trim3Q9R1R2 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim3Q9R1R2 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Trim3Q9R1R2 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Trim3Q9R1R2 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trim3Q9R1R2 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Trim3Q9R1R2 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trim3Q9R1R2 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim3Q9R1R2 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trim3Q9R1R2 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim3Q9R1R2 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim3Q9R1R2 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trim3Q9R1R2 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trim3Q9R1R2 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC13.65□□□□□ -0.22
Trim3Q9R1R2 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim3Q9R1R2 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim3Q9R1R2 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim3Q9R1R2 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim3Q9R1R2 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim3Q9R1R2 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim3Q9R1R2 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim3Q9R1R2 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trim3Q9R1R2 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim3Q9R1R2 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim3Q9R1R2 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms