Protein–RNA interactions for Protein: Q9R0A1

Clcn2, Chloride channel protein 2, mousemouse

Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn2Q9R0A1 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Clcn2Q9R0A1 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Clcn2Q9R0A1 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Clcn2Q9R0A1 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC14.85□□□□□ -0.03
Clcn2Q9R0A1 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Clcn2Q9R0A1 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Clcn2Q9R0A1 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Clcn2Q9R0A1 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Clcn2Q9R0A1 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC14.85□□□□□ -0.03
Clcn2Q9R0A1 AC132104.2-201ENSMUST00000215011 266 ntBASIC14.85□□□□□ -0.03
Clcn2Q9R0A1 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Clcn2Q9R0A1 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Clcn2Q9R0A1 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Clcn2Q9R0A1 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Clcn2Q9R0A1 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Clcn2Q9R0A1 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Clcn2Q9R0A1 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Clcn2Q9R0A1 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC14.85□□□□□ -0.03
Clcn2Q9R0A1 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Clcn2Q9R0A1 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Clcn2Q9R0A1 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC14.84□□□□□ -0.03
Clcn2Q9R0A1 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Clcn2Q9R0A1 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Clcn2Q9R0A1 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Clcn2Q9R0A1 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Clcn2Q9R0A1 Gm43056-201ENSMUST00000197865 2791 ntBASIC14.84□□□□□ -0.03
Clcn2Q9R0A1 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Clcn2Q9R0A1 Gm25911-201ENSMUST00000157621 56 ntBASIC14.84□□□□□ -0.03
Clcn2Q9R0A1 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Clcn2Q9R0A1 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Clcn2Q9R0A1 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Clcn2Q9R0A1 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Clcn2Q9R0A1 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Clcn2Q9R0A1 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Clcn2Q9R0A1 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Clcn2Q9R0A1 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Clcn2Q9R0A1 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Clcn2Q9R0A1 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Clcn2Q9R0A1 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
Clcn2Q9R0A1 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Clcn2Q9R0A1 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Clcn2Q9R0A1 AC166491.1-201ENSMUST00000227053 2308 ntBASIC14.83□□□□□ -0.03
Clcn2Q9R0A1 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Clcn2Q9R0A1 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Clcn2Q9R0A1 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Clcn2Q9R0A1 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Clcn2Q9R0A1 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Clcn2Q9R0A1 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Clcn2Q9R0A1 Gm26513-201ENSMUST00000181802 2489 ntBASIC14.83□□□□□ -0.04
Clcn2Q9R0A1 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Clcn2Q9R0A1 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Clcn2Q9R0A1 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Clcn2Q9R0A1 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Clcn2Q9R0A1 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Clcn2Q9R0A1 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Clcn2Q9R0A1 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
Clcn2Q9R0A1 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Clcn2Q9R0A1 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Clcn2Q9R0A1 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
Clcn2Q9R0A1 Mir3113-201ENSMUST00000175478 76 ntBASIC14.83□□□□□ -0.04
Clcn2Q9R0A1 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC14.83□□□□□ -0.04
Clcn2Q9R0A1 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Clcn2Q9R0A1 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Clcn2Q9R0A1 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Clcn2Q9R0A1 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Clcn2Q9R0A1 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Clcn2Q9R0A1 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Clcn2Q9R0A1 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Clcn2Q9R0A1 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Clcn2Q9R0A1 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC14.83□□□□□ -0.04
Clcn2Q9R0A1 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Clcn2Q9R0A1 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Clcn2Q9R0A1 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC14.83□□□□□ -0.04
Clcn2Q9R0A1 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Clcn2Q9R0A1 Ntrk2-209ENSMUST00000225950 2640 ntBASIC14.82□□□□□ -0.04
Clcn2Q9R0A1 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Clcn2Q9R0A1 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.82□□□□□ -0.04
Clcn2Q9R0A1 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Clcn2Q9R0A1 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC14.82□□□□□ -0.04
Clcn2Q9R0A1 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Clcn2Q9R0A1 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Clcn2Q9R0A1 Gm5177-201ENSMUST00000183092 997 ntBASIC14.82□□□□□ -0.04
Clcn2Q9R0A1 Gm45747-201ENSMUST00000212203 999 ntBASIC14.82□□□□□ -0.04
Clcn2Q9R0A1 AC174742.1-201ENSMUST00000218272 304 ntBASIC14.82□□□□□ -0.04
Clcn2Q9R0A1 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Clcn2Q9R0A1 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Clcn2Q9R0A1 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Clcn2Q9R0A1 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Clcn2Q9R0A1 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Clcn2Q9R0A1 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Clcn2Q9R0A1 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
Clcn2Q9R0A1 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Clcn2Q9R0A1 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Clcn2Q9R0A1 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
Clcn2Q9R0A1 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Clcn2Q9R0A1 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Clcn2Q9R0A1 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Clcn2Q9R0A1 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Clcn2Q9R0A1 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Clcn2Q9R0A1 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms