Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col4a4Q9QZR9 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col4a4Q9QZR9 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Col4a4Q9QZR9 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col4a4Q9QZR9 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Col4a4Q9QZR9 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Col4a4Q9QZR9 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC14.21□□□□□ -0.14
Col4a4Q9QZR9 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
Col4a4Q9QZR9 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Col4a4Q9QZR9 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC14.21□□□□□ -0.14
Col4a4Q9QZR9 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Col4a4Q9QZR9 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Col4a4Q9QZR9 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Col4a4Q9QZR9 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col4a4Q9QZR9 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Col4a4Q9QZR9 Gm13123-201ENSMUST00000122173 492 ntBASIC14.2□□□□□ -0.14
Col4a4Q9QZR9 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC14.2□□□□□ -0.14
Col4a4Q9QZR9 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC14.2□□□□□ -0.14
Col4a4Q9QZR9 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Col4a4Q9QZR9 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Col4a4Q9QZR9 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col4a4Q9QZR9 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Col4a4Q9QZR9 Gm10146-201ENSMUST00000072739 309 ntBASIC14.2□□□□□ -0.14
Col4a4Q9QZR9 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Col4a4Q9QZR9 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Col4a4Q9QZR9 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col4a4Q9QZR9 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC14.2□□□□□ -0.14
Col4a4Q9QZR9 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col4a4Q9QZR9 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Col4a4Q9QZR9 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Col4a4Q9QZR9 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Col4a4Q9QZR9 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC14.2□□□□□ -0.14
Col4a4Q9QZR9 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col4a4Q9QZR9 Gm10040-201ENSMUST00000080726 1662 ntBASIC14.2□□□□□ -0.14
Col4a4Q9QZR9 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Col4a4Q9QZR9 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col4a4Q9QZR9 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Col4a4Q9QZR9 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col4a4Q9QZR9 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col4a4Q9QZR9 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col4a4Q9QZR9 Ccdc166-201ENSMUST00000182172 2584 ntBASIC14.2□□□□□ -0.14
Col4a4Q9QZR9 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col4a4Q9QZR9 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col4a4Q9QZR9 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Col4a4Q9QZR9 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col4a4Q9QZR9 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col4a4Q9QZR9 Gm9431-201ENSMUST00000119765 1051 ntBASIC14.2□□□□□ -0.14
Col4a4Q9QZR9 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC14.2□□□□□ -0.14
Col4a4Q9QZR9 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC14.2□□□□□ -0.14
Col4a4Q9QZR9 Gm7046-201ENSMUST00000221351 977 ntBASIC14.2□□□□□ -0.14
Col4a4Q9QZR9 CT030182.1-201ENSMUST00000225935 533 ntBASIC14.2□□□□□ -0.14
Col4a4Q9QZR9 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col4a4Q9QZR9 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col4a4Q9QZR9 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC14.2□□□□□ -0.14
Col4a4Q9QZR9 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Col4a4Q9QZR9 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col4a4Q9QZR9 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col4a4Q9QZR9 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col4a4Q9QZR9 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col4a4Q9QZR9 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col4a4Q9QZR9 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Col4a4Q9QZR9 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col4a4Q9QZR9 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col4a4Q9QZR9 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col4a4Q9QZR9 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col4a4Q9QZR9 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col4a4Q9QZR9 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC14.19□□□□□ -0.14
Col4a4Q9QZR9 Gm5687-201ENSMUST00000118252 640 ntBASIC14.19□□□□□ -0.14
Col4a4Q9QZR9 Gm13369-201ENSMUST00000119442 987 ntBASIC14.19□□□□□ -0.14
Col4a4Q9QZR9 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col4a4Q9QZR9 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC14.19□□□□□ -0.14
Col4a4Q9QZR9 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col4a4Q9QZR9 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col4a4Q9QZR9 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC14.19□□□□□ -0.14
Col4a4Q9QZR9 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col4a4Q9QZR9 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col4a4Q9QZR9 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Col4a4Q9QZR9 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC14.19□□□□□ -0.14
Col4a4Q9QZR9 Gm13730-201ENSMUST00000121036 1462 ntBASIC14.19□□□□□ -0.14
Col4a4Q9QZR9 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col4a4Q9QZR9 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col4a4Q9QZR9 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC14.19□□□□□ -0.14
Col4a4Q9QZR9 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Col4a4Q9QZR9 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col4a4Q9QZR9 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col4a4Q9QZR9 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Col4a4Q9QZR9 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Col4a4Q9QZR9 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col4a4Q9QZR9 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Col4a4Q9QZR9 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col4a4Q9QZR9 Gm2606-201ENSMUST00000100754 1002 ntBASIC14.18□□□□□ -0.14
Col4a4Q9QZR9 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC14.18□□□□□ -0.14
Col4a4Q9QZR9 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC14.18□□□□□ -0.14
Col4a4Q9QZR9 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Col4a4Q9QZR9 Gm15770-201ENSMUST00000117498 584 ntBASIC14.18□□□□□ -0.14
Col4a4Q9QZR9 Gm12537-201ENSMUST00000119266 1002 ntBASIC14.18□□□□□ -0.14
Col4a4Q9QZR9 Gm12070-201ENSMUST00000119551 1002 ntBASIC14.18□□□□□ -0.14
Col4a4Q9QZR9 Gm12671-201ENSMUST00000119978 1002 ntBASIC14.18□□□□□ -0.14
Col4a4Q9QZR9 Gm13292-201ENSMUST00000120014 1000 ntBASIC14.18□□□□□ -0.14
Col4a4Q9QZR9 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms