Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
U2af1Q9D883 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
U2af1Q9D883 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
U2af1Q9D883 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
U2af1Q9D883 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
U2af1Q9D883 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
U2af1Q9D883 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
U2af1Q9D883 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
U2af1Q9D883 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC19.07■□□□□ 0.64
U2af1Q9D883 Gm27533-201ENSMUST00000183800 152 ntBASIC19.07■□□□□ 0.64
U2af1Q9D883 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
U2af1Q9D883 Gm20949-201ENSMUST00000206478 952 ntBASIC19.07■□□□□ 0.64
U2af1Q9D883 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
U2af1Q9D883 AC090659.2-201ENSMUST00000225378 1186 ntBASIC19.07■□□□□ 0.64
U2af1Q9D883 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
U2af1Q9D883 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
U2af1Q9D883 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
U2af1Q9D883 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
U2af1Q9D883 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
U2af1Q9D883 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
U2af1Q9D883 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
U2af1Q9D883 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
U2af1Q9D883 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
U2af1Q9D883 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
U2af1Q9D883 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
U2af1Q9D883 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
U2af1Q9D883 Gm44443-201ENSMUST00000204396 5633 ntBASIC19.06■□□□□ 0.64
U2af1Q9D883 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
U2af1Q9D883 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
U2af1Q9D883 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
U2af1Q9D883 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
U2af1Q9D883 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
U2af1Q9D883 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
U2af1Q9D883 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
U2af1Q9D883 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
U2af1Q9D883 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
U2af1Q9D883 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
U2af1Q9D883 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
U2af1Q9D883 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
U2af1Q9D883 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
U2af1Q9D883 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
U2af1Q9D883 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
U2af1Q9D883 Gm25144-201ENSMUST00000179561 110 ntBASIC19.06■□□□□ 0.64
U2af1Q9D883 Gm25352-201ENSMUST00000179815 110 ntBASIC19.06■□□□□ 0.64
U2af1Q9D883 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
U2af1Q9D883 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
U2af1Q9D883 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
U2af1Q9D883 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
U2af1Q9D883 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
U2af1Q9D883 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
U2af1Q9D883 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
U2af1Q9D883 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
U2af1Q9D883 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC19.06■□□□□ 0.64
U2af1Q9D883 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC19.06■□□□□ 0.64
U2af1Q9D883 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
U2af1Q9D883 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
U2af1Q9D883 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
U2af1Q9D883 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
U2af1Q9D883 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
U2af1Q9D883 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC19.05■□□□□ 0.64
U2af1Q9D883 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
U2af1Q9D883 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
U2af1Q9D883 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
U2af1Q9D883 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
U2af1Q9D883 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
U2af1Q9D883 Gm24543-201ENSMUST00000103867 82 ntBASIC19.05■□□□□ 0.64
U2af1Q9D883 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC19.05■□□□□ 0.64
U2af1Q9D883 Gm27631-201ENSMUST00000184163 466 ntBASIC19.05■□□□□ 0.64
U2af1Q9D883 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
U2af1Q9D883 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
U2af1Q9D883 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
U2af1Q9D883 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
U2af1Q9D883 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
U2af1Q9D883 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
U2af1Q9D883 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
U2af1Q9D883 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
U2af1Q9D883 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
U2af1Q9D883 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
U2af1Q9D883 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
U2af1Q9D883 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
U2af1Q9D883 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
U2af1Q9D883 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
U2af1Q9D883 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
U2af1Q9D883 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
U2af1Q9D883 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
U2af1Q9D883 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
U2af1Q9D883 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
U2af1Q9D883 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
U2af1Q9D883 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC19.04■□□□□ 0.64
U2af1Q9D883 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
U2af1Q9D883 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
U2af1Q9D883 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
U2af1Q9D883 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
U2af1Q9D883 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
U2af1Q9D883 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
U2af1Q9D883 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
U2af1Q9D883 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
U2af1Q9D883 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
U2af1Q9D883 Ap5m1-205ENSMUST00000227431 3757 ntBASIC19.04■□□□□ 0.64
U2af1Q9D883 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms