Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Stag1Q9D3E6 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Stag1Q9D3E6 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Stag1Q9D3E6 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Stag1Q9D3E6 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Stag1Q9D3E6 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC17.25■□□□□ 0.35
Stag1Q9D3E6 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Stag1Q9D3E6 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Stag1Q9D3E6 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Stag1Q9D3E6 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Stag1Q9D3E6 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Stag1Q9D3E6 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC17.25■□□□□ 0.35
Stag1Q9D3E6 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC17.25■□□□□ 0.35
Stag1Q9D3E6 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Stag1Q9D3E6 Gm45195-201ENSMUST00000205597 1008 ntBASIC17.25■□□□□ 0.35
Stag1Q9D3E6 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC17.25■□□□□ 0.35
Stag1Q9D3E6 Gm7390-201ENSMUST00000212452 1216 ntBASIC17.25■□□□□ 0.35
Stag1Q9D3E6 AC123645.1-201ENSMUST00000228469 605 ntBASIC17.25■□□□□ 0.35
Stag1Q9D3E6 AC156016.3-201ENSMUST00000228623 344 ntBASIC17.25■□□□□ 0.35
Stag1Q9D3E6 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Stag1Q9D3E6 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Stag1Q9D3E6 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC17.25■□□□□ 0.35
Stag1Q9D3E6 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC17.25■□□□□ 0.35
Stag1Q9D3E6 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Stag1Q9D3E6 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Stag1Q9D3E6 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Stag1Q9D3E6 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Stag1Q9D3E6 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Stag1Q9D3E6 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Stag1Q9D3E6 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Stag1Q9D3E6 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Stag1Q9D3E6 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Stag1Q9D3E6 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Stag1Q9D3E6 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Stag1Q9D3E6 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Stag1Q9D3E6 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Stag1Q9D3E6 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Stag1Q9D3E6 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Stag1Q9D3E6 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Stag1Q9D3E6 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Stag1Q9D3E6 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Stag1Q9D3E6 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Stag1Q9D3E6 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Stag1Q9D3E6 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Stag1Q9D3E6 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Stag1Q9D3E6 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC17.24■□□□□ 0.35
Stag1Q9D3E6 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Stag1Q9D3E6 Hist1h2al-201ENSMUST00000091708 339 ntBASIC17.24■□□□□ 0.35
Stag1Q9D3E6 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Stag1Q9D3E6 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Stag1Q9D3E6 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Stag1Q9D3E6 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Stag1Q9D3E6 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC17.24■□□□□ 0.35
Stag1Q9D3E6 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Stag1Q9D3E6 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
Stag1Q9D3E6 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Stag1Q9D3E6 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Stag1Q9D3E6 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Stag1Q9D3E6 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC17.23■□□□□ 0.35
Stag1Q9D3E6 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Stag1Q9D3E6 BC001981-202ENSMUST00000191393 1545 ntBASIC17.23■□□□□ 0.35
Stag1Q9D3E6 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC17.23■□□□□ 0.35
Stag1Q9D3E6 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC17.23■□□□□ 0.35
Stag1Q9D3E6 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Stag1Q9D3E6 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
Stag1Q9D3E6 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC17.23■□□□□ 0.35
Stag1Q9D3E6 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Stag1Q9D3E6 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC17.23■□□□□ 0.35
Stag1Q9D3E6 Gm10275-202ENSMUST00000168697 495 ntBASIC17.23■□□□□ 0.35
Stag1Q9D3E6 Gm9522-201ENSMUST00000182394 926 ntBASIC17.23■□□□□ 0.35
Stag1Q9D3E6 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC17.23■□□□□ 0.35
Stag1Q9D3E6 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC17.23■□□□□ 0.35
Stag1Q9D3E6 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC17.23■□□□□ 0.35
Stag1Q9D3E6 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Stag1Q9D3E6 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Stag1Q9D3E6 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Stag1Q9D3E6 Gm10275-201ENSMUST00000092620 635 ntBASIC17.23■□□□□ 0.35
Stag1Q9D3E6 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Stag1Q9D3E6 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Stag1Q9D3E6 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC17.23■□□□□ 0.35
Stag1Q9D3E6 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Stag1Q9D3E6 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Stag1Q9D3E6 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Stag1Q9D3E6 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
Stag1Q9D3E6 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Stag1Q9D3E6 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Stag1Q9D3E6 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Stag1Q9D3E6 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Stag1Q9D3E6 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Stag1Q9D3E6 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Stag1Q9D3E6 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC17.22■□□□□ 0.35
Stag1Q9D3E6 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Stag1Q9D3E6 Gm22189-201ENSMUST00000103822 86 ntBASIC17.22■□□□□ 0.35
Stag1Q9D3E6 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Stag1Q9D3E6 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Stag1Q9D3E6 Gm7820-201ENSMUST00000121012 1052 ntBASIC17.22■□□□□ 0.35
Stag1Q9D3E6 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC17.22■□□□□ 0.35
Stag1Q9D3E6 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Stag1Q9D3E6 Gm42612-201ENSMUST00000197986 623 ntBASIC17.22■□□□□ 0.35
Stag1Q9D3E6 Gm43170-201ENSMUST00000199827 612 ntBASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms