Protein–RNA interactions for Protein: Q9CYW4

Hdhd3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdhd3Q9CYW4 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hdhd3Q9CYW4 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hdhd3Q9CYW4 Gm26513-201ENSMUST00000181802 2489 ntBASIC11.83□□□□□ -0.52
Hdhd3Q9CYW4 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hdhd3Q9CYW4 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hdhd3Q9CYW4 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hdhd3Q9CYW4 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Hdhd3Q9CYW4 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
Hdhd3Q9CYW4 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hdhd3Q9CYW4 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC11.82□□□□□ -0.52
Hdhd3Q9CYW4 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hdhd3Q9CYW4 Ssr1-204ENSMUST00000225319 1610 ntBASIC11.82□□□□□ -0.52
Hdhd3Q9CYW4 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hdhd3Q9CYW4 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hdhd3Q9CYW4 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hdhd3Q9CYW4 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC11.82□□□□□ -0.52
Hdhd3Q9CYW4 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hdhd3Q9CYW4 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC11.82□□□□□ -0.52
Hdhd3Q9CYW4 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hdhd3Q9CYW4 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC11.82□□□□□ -0.52
Hdhd3Q9CYW4 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hdhd3Q9CYW4 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
Hdhd3Q9CYW4 AC108846.1-201ENSMUST00000214531 513 ntBASIC11.82□□□□□ -0.52
Hdhd3Q9CYW4 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Hdhd3Q9CYW4 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hdhd3Q9CYW4 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hdhd3Q9CYW4 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
Hdhd3Q9CYW4 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hdhd3Q9CYW4 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Hdhd3Q9CYW4 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hdhd3Q9CYW4 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Hdhd3Q9CYW4 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hdhd3Q9CYW4 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Hdhd3Q9CYW4 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hdhd3Q9CYW4 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hdhd3Q9CYW4 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hdhd3Q9CYW4 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hdhd3Q9CYW4 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hdhd3Q9CYW4 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hdhd3Q9CYW4 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC11.81□□□□□ -0.52
Hdhd3Q9CYW4 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hdhd3Q9CYW4 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC11.81□□□□□ -0.52
Hdhd3Q9CYW4 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC11.81□□□□□ -0.52
Hdhd3Q9CYW4 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Hdhd3Q9CYW4 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Hdhd3Q9CYW4 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hdhd3Q9CYW4 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hdhd3Q9CYW4 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC11.81□□□□□ -0.52
Hdhd3Q9CYW4 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hdhd3Q9CYW4 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Hdhd3Q9CYW4 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hdhd3Q9CYW4 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hdhd3Q9CYW4 Gm7935-201ENSMUST00000100555 1278 ntBASIC11.81□□□□□ -0.52
Hdhd3Q9CYW4 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Hdhd3Q9CYW4 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hdhd3Q9CYW4 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hdhd3Q9CYW4 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC11.81□□□□□ -0.52
Hdhd3Q9CYW4 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC11.81□□□□□ -0.52
Hdhd3Q9CYW4 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Hdhd3Q9CYW4 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC11.81□□□□□ -0.52
Hdhd3Q9CYW4 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC11.81□□□□□ -0.52
Hdhd3Q9CYW4 Gm6296-201ENSMUST00000222599 943 ntBASIC11.81□□□□□ -0.52
Hdhd3Q9CYW4 AC124569.2-201ENSMUST00000225998 818 ntBASIC11.81□□□□□ -0.52
Hdhd3Q9CYW4 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC11.81□□□□□ -0.52
Hdhd3Q9CYW4 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Hdhd3Q9CYW4 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hdhd3Q9CYW4 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hdhd3Q9CYW4 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Hdhd3Q9CYW4 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hdhd3Q9CYW4 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Hdhd3Q9CYW4 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hdhd3Q9CYW4 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hdhd3Q9CYW4 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hdhd3Q9CYW4 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Hdhd3Q9CYW4 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hdhd3Q9CYW4 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Hdhd3Q9CYW4 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hdhd3Q9CYW4 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hdhd3Q9CYW4 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hdhd3Q9CYW4 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hdhd3Q9CYW4 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hdhd3Q9CYW4 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
Hdhd3Q9CYW4 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hdhd3Q9CYW4 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hdhd3Q9CYW4 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hdhd3Q9CYW4 Gm5184-201ENSMUST00000220417 1702 ntBASIC11.8□□□□□ -0.52
Hdhd3Q9CYW4 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
Hdhd3Q9CYW4 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC11.8□□□□□ -0.52
Hdhd3Q9CYW4 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hdhd3Q9CYW4 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hdhd3Q9CYW4 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hdhd3Q9CYW4 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC11.8□□□□□ -0.52
Hdhd3Q9CYW4 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Hdhd3Q9CYW4 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hdhd3Q9CYW4 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hdhd3Q9CYW4 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hdhd3Q9CYW4 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Hdhd3Q9CYW4 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Hdhd3Q9CYW4 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Hdhd3Q9CYW4 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms