Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ssr1Q9CY50 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ssr1Q9CY50 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ssr1Q9CY50 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ssr1Q9CY50 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Ssr1Q9CY50 Gm37691-201ENSMUST00000192147 2573 ntBASIC15.79■□□□□ 0.12
Ssr1Q9CY50 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ssr1Q9CY50 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ssr1Q9CY50 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ssr1Q9CY50 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ssr1Q9CY50 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ssr1Q9CY50 CT030684.3-201ENSMUST00000227308 2445 ntBASIC15.78■□□□□ 0.12
Ssr1Q9CY50 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ssr1Q9CY50 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ssr1Q9CY50 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ssr1Q9CY50 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ssr1Q9CY50 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ssr1Q9CY50 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ssr1Q9CY50 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ssr1Q9CY50 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC15.78■□□□□ 0.12
Ssr1Q9CY50 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ssr1Q9CY50 Gm18246-201ENSMUST00000221023 728 ntBASIC15.78■□□□□ 0.12
Ssr1Q9CY50 CT010506.4-201ENSMUST00000225457 351 ntBASIC15.78■□□□□ 0.12
Ssr1Q9CY50 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC15.78■□□□□ 0.12
Ssr1Q9CY50 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ssr1Q9CY50 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ssr1Q9CY50 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ssr1Q9CY50 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ssr1Q9CY50 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ssr1Q9CY50 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Ssr1Q9CY50 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ssr1Q9CY50 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ssr1Q9CY50 Ntrk2-209ENSMUST00000225950 2640 ntBASIC15.78■□□□□ 0.12
Ssr1Q9CY50 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ssr1Q9CY50 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ssr1Q9CY50 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC15.78■□□□□ 0.12
Ssr1Q9CY50 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ssr1Q9CY50 Best4-ps-201ENSMUST00000129783 1380 ntBASIC15.77■□□□□ 0.12
Ssr1Q9CY50 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.12
Ssr1Q9CY50 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ssr1Q9CY50 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ssr1Q9CY50 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ssr1Q9CY50 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ssr1Q9CY50 AC130669.1-201ENSMUST00000228537 1672 ntBASIC15.77■□□□□ 0.12
Ssr1Q9CY50 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ssr1Q9CY50 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ssr1Q9CY50 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Ssr1Q9CY50 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ssr1Q9CY50 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ssr1Q9CY50 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Ssr1Q9CY50 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Ssr1Q9CY50 Gm6184-201ENSMUST00000120403 1261 ntBASIC15.77■□□□□ 0.12
Ssr1Q9CY50 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC15.77■□□□□ 0.12
Ssr1Q9CY50 Gm10060-201ENSMUST00000212002 111 ntBASIC15.77■□□□□ 0.12
Ssr1Q9CY50 AC164567.1-201ENSMUST00000219185 960 ntBASIC15.77■□□□□ 0.12
Ssr1Q9CY50 AC161829.1-201ENSMUST00000220298 281 ntBASIC15.77■□□□□ 0.12
Ssr1Q9CY50 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ssr1Q9CY50 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Ssr1Q9CY50 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC15.77■□□□□ 0.12
Ssr1Q9CY50 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ssr1Q9CY50 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ssr1Q9CY50 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ssr1Q9CY50 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ssr1Q9CY50 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC15.77■□□□□ 0.11
Ssr1Q9CY50 Gm37105-201ENSMUST00000192251 2085 ntBASIC15.77■□□□□ 0.11
Ssr1Q9CY50 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ssr1Q9CY50 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ssr1Q9CY50 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ssr1Q9CY50 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Ssr1Q9CY50 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ssr1Q9CY50 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ssr1Q9CY50 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ssr1Q9CY50 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ssr1Q9CY50 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Ssr1Q9CY50 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ssr1Q9CY50 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ssr1Q9CY50 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC15.76■□□□□ 0.11
Ssr1Q9CY50 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC15.76■□□□□ 0.11
Ssr1Q9CY50 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Ssr1Q9CY50 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ssr1Q9CY50 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Ssr1Q9CY50 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC15.76■□□□□ 0.11
Ssr1Q9CY50 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Ssr1Q9CY50 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC15.76■□□□□ 0.11
Ssr1Q9CY50 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC15.76■□□□□ 0.11
Ssr1Q9CY50 Gm28659-201ENSMUST00000188013 759 ntBASIC15.76■□□□□ 0.11
Ssr1Q9CY50 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC15.76■□□□□ 0.11
Ssr1Q9CY50 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Ssr1Q9CY50 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Ssr1Q9CY50 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ssr1Q9CY50 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC15.76■□□□□ 0.11
Ssr1Q9CY50 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
Ssr1Q9CY50 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC15.76■□□□□ 0.11
Ssr1Q9CY50 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Ssr1Q9CY50 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ssr1Q9CY50 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Ssr1Q9CY50 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ssr1Q9CY50 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ssr1Q9CY50 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ssr1Q9CY50 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms