Protein–RNA interactions for Protein: Q9CXF7

Chd1l, Chromodomain-helicase-DNA-binding protein 1-like, mousemouse

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1lQ9CXF7 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chd1lQ9CXF7 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chd1lQ9CXF7 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chd1lQ9CXF7 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chd1lQ9CXF7 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chd1lQ9CXF7 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Chd1lQ9CXF7 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Chd1lQ9CXF7 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chd1lQ9CXF7 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Chd1lQ9CXF7 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Chd1lQ9CXF7 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chd1lQ9CXF7 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chd1lQ9CXF7 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chd1lQ9CXF7 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chd1lQ9CXF7 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chd1lQ9CXF7 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Chd1lQ9CXF7 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chd1lQ9CXF7 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chd1lQ9CXF7 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chd1lQ9CXF7 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chd1lQ9CXF7 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chd1lQ9CXF7 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC16.39■□□□□ 0.21
Chd1lQ9CXF7 Gm15372-201ENSMUST00000120729 834 ntBASIC16.39■□□□□ 0.21
Chd1lQ9CXF7 Gm11780-201ENSMUST00000136880 516 ntBASIC16.39■□□□□ 0.21
Chd1lQ9CXF7 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Chd1lQ9CXF7 Gm10252-201ENSMUST00000209541 832 ntBASIC16.39■□□□□ 0.21
Chd1lQ9CXF7 Otx2os1-206ENSMUST00000228153 787 ntBASIC16.39■□□□□ 0.21
Chd1lQ9CXF7 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chd1lQ9CXF7 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chd1lQ9CXF7 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC16.39■□□□□ 0.21
Chd1lQ9CXF7 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chd1lQ9CXF7 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Chd1lQ9CXF7 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chd1lQ9CXF7 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Chd1lQ9CXF7 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chd1lQ9CXF7 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chd1lQ9CXF7 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chd1lQ9CXF7 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Chd1lQ9CXF7 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Chd1lQ9CXF7 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chd1lQ9CXF7 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chd1lQ9CXF7 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chd1lQ9CXF7 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chd1lQ9CXF7 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chd1lQ9CXF7 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Chd1lQ9CXF7 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chd1lQ9CXF7 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chd1lQ9CXF7 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chd1lQ9CXF7 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Chd1lQ9CXF7 Gm11405-201ENSMUST00000118689 1556 ntBASIC16.38■□□□□ 0.21
Chd1lQ9CXF7 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
Chd1lQ9CXF7 Gm12626-201ENSMUST00000117339 1983 ntBASIC16.38■□□□□ 0.21
Chd1lQ9CXF7 Gm12623-201ENSMUST00000119849 1983 ntBASIC16.38■□□□□ 0.21
Chd1lQ9CXF7 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Chd1lQ9CXF7 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Chd1lQ9CXF7 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC16.38■□□□□ 0.21
Chd1lQ9CXF7 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Chd1lQ9CXF7 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Chd1lQ9CXF7 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Chd1lQ9CXF7 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Chd1lQ9CXF7 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Chd1lQ9CXF7 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Chd1lQ9CXF7 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
Chd1lQ9CXF7 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Chd1lQ9CXF7 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Chd1lQ9CXF7 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Chd1lQ9CXF7 AA414768-201ENSMUST00000121924 1257 ntBASIC16.38■□□□□ 0.21
Chd1lQ9CXF7 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC16.38■□□□□ 0.21
Chd1lQ9CXF7 Gm2308-201ENSMUST00000166539 1004 ntBASIC16.38■□□□□ 0.21
Chd1lQ9CXF7 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Chd1lQ9CXF7 Gm9726-201ENSMUST00000180321 678 ntBASIC16.38■□□□□ 0.21
Chd1lQ9CXF7 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Chd1lQ9CXF7 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Chd1lQ9CXF7 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC16.38■□□□□ 0.21
Chd1lQ9CXF7 AC153889.1-201ENSMUST00000219257 330 ntBASIC16.38■□□□□ 0.21
Chd1lQ9CXF7 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Chd1lQ9CXF7 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Chd1lQ9CXF7 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Chd1lQ9CXF7 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC16.38■□□□□ 0.21
Chd1lQ9CXF7 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Chd1lQ9CXF7 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Chd1lQ9CXF7 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Chd1lQ9CXF7 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC16.38■□□□□ 0.21
Chd1lQ9CXF7 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Chd1lQ9CXF7 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Chd1lQ9CXF7 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Chd1lQ9CXF7 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Chd1lQ9CXF7 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Chd1lQ9CXF7 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Chd1lQ9CXF7 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Chd1lQ9CXF7 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Chd1lQ9CXF7 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Chd1lQ9CXF7 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Chd1lQ9CXF7 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Chd1lQ9CXF7 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Chd1lQ9CXF7 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Chd1lQ9CXF7 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Chd1lQ9CXF7 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Chd1lQ9CXF7 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Chd1lQ9CXF7 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms