Protein–RNA interactions for Protein: Q9CWY8

Rnaseh2a, Ribonuclease H2 subunit A, mousemouse

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnaseh2aQ9CWY8 AC153526.5-201ENSMUST00000218661 2147 ntBASIC17.11■□□□□ 0.33
Rnaseh2aQ9CWY8 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rnaseh2aQ9CWY8 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnaseh2aQ9CWY8 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnaseh2aQ9CWY8 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rnaseh2aQ9CWY8 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnaseh2aQ9CWY8 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnaseh2aQ9CWY8 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Rnaseh2aQ9CWY8 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnaseh2aQ9CWY8 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rnaseh2aQ9CWY8 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnaseh2aQ9CWY8 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnaseh2aQ9CWY8 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC17.1■□□□□ 0.33
Rnaseh2aQ9CWY8 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC17.1■□□□□ 0.33
Rnaseh2aQ9CWY8 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC17.1■□□□□ 0.33
Rnaseh2aQ9CWY8 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC17.1■□□□□ 0.33
Rnaseh2aQ9CWY8 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rnaseh2aQ9CWY8 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC17.1■□□□□ 0.33
Rnaseh2aQ9CWY8 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC17.1■□□□□ 0.33
Rnaseh2aQ9CWY8 AC166997.1-201ENSMUST00000225122 572 ntBASIC17.1■□□□□ 0.33
Rnaseh2aQ9CWY8 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Rnaseh2aQ9CWY8 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnaseh2aQ9CWY8 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnaseh2aQ9CWY8 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnaseh2aQ9CWY8 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rnaseh2aQ9CWY8 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Rnaseh2aQ9CWY8 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC17.1■□□□□ 0.33
Rnaseh2aQ9CWY8 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnaseh2aQ9CWY8 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.1■□□□□ 0.33
Rnaseh2aQ9CWY8 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Rnaseh2aQ9CWY8 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rnaseh2aQ9CWY8 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnaseh2aQ9CWY8 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnaseh2aQ9CWY8 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Rnaseh2aQ9CWY8 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnaseh2aQ9CWY8 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnaseh2aQ9CWY8 Gm22323-201ENSMUST00000103832 109 ntBASIC17.09■□□□□ 0.33
Rnaseh2aQ9CWY8 Gm15957-201ENSMUST00000118893 974 ntBASIC17.09■□□□□ 0.33
Rnaseh2aQ9CWY8 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rnaseh2aQ9CWY8 Gm27682-201ENSMUST00000183930 110 ntBASIC17.09■□□□□ 0.33
Rnaseh2aQ9CWY8 Gm7895-201ENSMUST00000187459 1173 ntBASIC17.09■□□□□ 0.33
Rnaseh2aQ9CWY8 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC17.09■□□□□ 0.33
Rnaseh2aQ9CWY8 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnaseh2aQ9CWY8 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC17.09■□□□□ 0.33
Rnaseh2aQ9CWY8 Gm8598-201ENSMUST00000221184 836 ntBASIC17.09■□□□□ 0.33
Rnaseh2aQ9CWY8 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC17.09■□□□□ 0.33
Rnaseh2aQ9CWY8 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC17.09■□□□□ 0.33
Rnaseh2aQ9CWY8 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Rnaseh2aQ9CWY8 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnaseh2aQ9CWY8 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnaseh2aQ9CWY8 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Rnaseh2aQ9CWY8 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rnaseh2aQ9CWY8 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Rnaseh2aQ9CWY8 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnaseh2aQ9CWY8 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnaseh2aQ9CWY8 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rnaseh2aQ9CWY8 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnaseh2aQ9CWY8 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnaseh2aQ9CWY8 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rnaseh2aQ9CWY8 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnaseh2aQ9CWY8 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rnaseh2aQ9CWY8 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rnaseh2aQ9CWY8 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rnaseh2aQ9CWY8 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Rnaseh2aQ9CWY8 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rnaseh2aQ9CWY8 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rnaseh2aQ9CWY8 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rnaseh2aQ9CWY8 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rnaseh2aQ9CWY8 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rnaseh2aQ9CWY8 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rnaseh2aQ9CWY8 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rnaseh2aQ9CWY8 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rnaseh2aQ9CWY8 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rnaseh2aQ9CWY8 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rnaseh2aQ9CWY8 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rnaseh2aQ9CWY8 Gm12882-201ENSMUST00000121696 517 ntBASIC17.08■□□□□ 0.32
Rnaseh2aQ9CWY8 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC17.08■□□□□ 0.32
Rnaseh2aQ9CWY8 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rnaseh2aQ9CWY8 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rnaseh2aQ9CWY8 Gm18473-201ENSMUST00000220543 868 ntBASIC17.08■□□□□ 0.32
Rnaseh2aQ9CWY8 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC17.08■□□□□ 0.32
Rnaseh2aQ9CWY8 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rnaseh2aQ9CWY8 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rnaseh2aQ9CWY8 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rnaseh2aQ9CWY8 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rnaseh2aQ9CWY8 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rnaseh2aQ9CWY8 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rnaseh2aQ9CWY8 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Rnaseh2aQ9CWY8 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rnaseh2aQ9CWY8 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rnaseh2aQ9CWY8 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.08■□□□□ 0.32
Rnaseh2aQ9CWY8 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rnaseh2aQ9CWY8 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rnaseh2aQ9CWY8 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Rnaseh2aQ9CWY8 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rnaseh2aQ9CWY8 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Rnaseh2aQ9CWY8 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rnaseh2aQ9CWY8 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rnaseh2aQ9CWY8 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rnaseh2aQ9CWY8 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms