Protein–RNA interactions for Protein: Q9CWS1

Rnf135, E3 ubiquitin-protein ligase RNF135, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf135Q9CWS1 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rnf135Q9CWS1 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rnf135Q9CWS1 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rnf135Q9CWS1 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rnf135Q9CWS1 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Rnf135Q9CWS1 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
Rnf135Q9CWS1 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rnf135Q9CWS1 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rnf135Q9CWS1 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Rnf135Q9CWS1 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Rnf135Q9CWS1 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rnf135Q9CWS1 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rnf135Q9CWS1 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC15.13■□□□□ 0.01
Rnf135Q9CWS1 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rnf135Q9CWS1 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rnf135Q9CWS1 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rnf135Q9CWS1 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf135Q9CWS1 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Rnf135Q9CWS1 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
Rnf135Q9CWS1 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf135Q9CWS1 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf135Q9CWS1 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf135Q9CWS1 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf135Q9CWS1 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf135Q9CWS1 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf135Q9CWS1 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf135Q9CWS1 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf135Q9CWS1 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf135Q9CWS1 Gm8749-201ENSMUST00000117737 331 ntBASIC15.12■□□□□ 0.01
Rnf135Q9CWS1 Gm13464-201ENSMUST00000119418 935 ntBASIC15.12■□□□□ 0.01
Rnf135Q9CWS1 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC15.12■□□□□ 0.01
Rnf135Q9CWS1 Gm9726-201ENSMUST00000180321 678 ntBASIC15.12■□□□□ 0.01
Rnf135Q9CWS1 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
Rnf135Q9CWS1 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC15.12■□□□□ 0.01
Rnf135Q9CWS1 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf135Q9CWS1 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Rnf135Q9CWS1 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf135Q9CWS1 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Rnf135Q9CWS1 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf135Q9CWS1 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf135Q9CWS1 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC15.12■□□□□ 0.01
Rnf135Q9CWS1 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf135Q9CWS1 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf135Q9CWS1 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf135Q9CWS1 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Rnf135Q9CWS1 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf135Q9CWS1 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf135Q9CWS1 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Rnf135Q9CWS1 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Rnf135Q9CWS1 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Rnf135Q9CWS1 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf135Q9CWS1 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC15.11■□□□□ 0.01
Rnf135Q9CWS1 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf135Q9CWS1 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf135Q9CWS1 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf135Q9CWS1 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf135Q9CWS1 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf135Q9CWS1 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf135Q9CWS1 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf135Q9CWS1 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf135Q9CWS1 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Rnf135Q9CWS1 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf135Q9CWS1 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf135Q9CWS1 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf135Q9CWS1 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf135Q9CWS1 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC15.11■□□□□ 0.01
Rnf135Q9CWS1 Gm17271-201ENSMUST00000165535 355 ntBASIC15.11■□□□□ 0.01
Rnf135Q9CWS1 Auts2-212ENSMUST00000178555 309 ntBASIC15.11■□□□□ 0.01
Rnf135Q9CWS1 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf135Q9CWS1 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC15.11■□□□□ 0.01
Rnf135Q9CWS1 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC15.11■□□□□ 0.01
Rnf135Q9CWS1 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC15.11■□□□□ 0.01
Rnf135Q9CWS1 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Rnf135Q9CWS1 Gm15500-202ENSMUST00000071641 1019 ntBASIC15.11■□□□□ 0.01
Rnf135Q9CWS1 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf135Q9CWS1 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf135Q9CWS1 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Rnf135Q9CWS1 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf135Q9CWS1 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC15.11■□□□□ 0.01
Rnf135Q9CWS1 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf135Q9CWS1 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf135Q9CWS1 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf135Q9CWS1 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf135Q9CWS1 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf135Q9CWS1 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf135Q9CWS1 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf135Q9CWS1 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf135Q9CWS1 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf135Q9CWS1 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf135Q9CWS1 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Rnf135Q9CWS1 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC15.1■□□□□ 0.01
Rnf135Q9CWS1 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf135Q9CWS1 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC15.1■□□□□ 0.01
Rnf135Q9CWS1 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC15.1■□□□□ 0.01
Rnf135Q9CWS1 Gm7229-201ENSMUST00000214719 1007 ntBASIC15.1■□□□□ 0.01
Rnf135Q9CWS1 Chchd1-203ENSMUST00000224633 557 ntBASIC15.1■□□□□ 0.01
Rnf135Q9CWS1 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf135Q9CWS1 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf135Q9CWS1 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Rnf135Q9CWS1 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms