Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Retreg3Q9CQV4 Gm8510-201ENSMUST00000189202 895 ntBASIC14.69□□□□□ -0.06
Retreg3Q9CQV4 Gm2316-201ENSMUST00000190613 921 ntBASIC14.69□□□□□ -0.06
Retreg3Q9CQV4 Gm29107-201ENSMUST00000190910 347 ntBASIC14.69□□□□□ -0.06
Retreg3Q9CQV4 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Retreg3Q9CQV4 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC14.69□□□□□ -0.06
Retreg3Q9CQV4 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC14.69□□□□□ -0.06
Retreg3Q9CQV4 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC14.69□□□□□ -0.06
Retreg3Q9CQV4 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Retreg3Q9CQV4 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Retreg3Q9CQV4 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Retreg3Q9CQV4 CT030159.3-201ENSMUST00000222936 1481 ntTSL 5 BASIC14.69□□□□□ -0.06
Retreg3Q9CQV4 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Retreg3Q9CQV4 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Retreg3Q9CQV4 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Retreg3Q9CQV4 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Retreg3Q9CQV4 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Retreg3Q9CQV4 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Retreg3Q9CQV4 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Retreg3Q9CQV4 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Retreg3Q9CQV4 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Retreg3Q9CQV4 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Retreg3Q9CQV4 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Retreg3Q9CQV4 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Retreg3Q9CQV4 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Retreg3Q9CQV4 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Retreg3Q9CQV4 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC14.68□□□□□ -0.06
Retreg3Q9CQV4 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Retreg3Q9CQV4 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Retreg3Q9CQV4 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Retreg3Q9CQV4 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Retreg3Q9CQV4 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Retreg3Q9CQV4 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Retreg3Q9CQV4 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Retreg3Q9CQV4 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC14.68□□□□□ -0.06
Retreg3Q9CQV4 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Retreg3Q9CQV4 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Retreg3Q9CQV4 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Retreg3Q9CQV4 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Retreg3Q9CQV4 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC14.68□□□□□ -0.06
Retreg3Q9CQV4 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC14.68□□□□□ -0.06
Retreg3Q9CQV4 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Retreg3Q9CQV4 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC14.68□□□□□ -0.06
Retreg3Q9CQV4 2900064F13Rik-201ENSMUST00000202166 1008 ntBASIC14.68□□□□□ -0.06
Retreg3Q9CQV4 Gm5312-201ENSMUST00000203728 547 ntBASIC14.68□□□□□ -0.06
Retreg3Q9CQV4 Gm18057-201ENSMUST00000208220 503 ntBASIC14.68□□□□□ -0.06
Retreg3Q9CQV4 A930002H02Rik-201ENSMUST00000208672 1178 ntBASIC14.68□□□□□ -0.06
Retreg3Q9CQV4 Gm9520-201ENSMUST00000209460 1253 ntBASIC14.68□□□□□ -0.06
Retreg3Q9CQV4 Tcf21-201ENSMUST00000049930 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Retreg3Q9CQV4 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Retreg3Q9CQV4 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Retreg3Q9CQV4 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Retreg3Q9CQV4 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Retreg3Q9CQV4 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Retreg3Q9CQV4 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Retreg3Q9CQV4 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Retreg3Q9CQV4 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Retreg3Q9CQV4 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Retreg3Q9CQV4 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retreg3Q9CQV4 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retreg3Q9CQV4 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Retreg3Q9CQV4 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retreg3Q9CQV4 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC14.67□□□□□ -0.06
Retreg3Q9CQV4 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC14.67□□□□□ -0.06
Retreg3Q9CQV4 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retreg3Q9CQV4 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retreg3Q9CQV4 Gm43697-201ENSMUST00000199637 2581 ntBASIC14.67□□□□□ -0.06
Retreg3Q9CQV4 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retreg3Q9CQV4 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC14.67□□□□□ -0.06
Retreg3Q9CQV4 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC14.67□□□□□ -0.06
Retreg3Q9CQV4 Gm13616-201ENSMUST00000120600 222 ntBASIC14.67□□□□□ -0.06
Retreg3Q9CQV4 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Retreg3Q9CQV4 Gm16701-202ENSMUST00000180995 934 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Retreg3Q9CQV4 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC14.67□□□□□ -0.06
Retreg3Q9CQV4 Gm37230-201ENSMUST00000194491 818 ntBASIC14.67□□□□□ -0.06
Retreg3Q9CQV4 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC14.67□□□□□ -0.06
Retreg3Q9CQV4 Pafah1b1-ps2-201ENSMUST00000207209 1223 ntBASIC14.67□□□□□ -0.06
Retreg3Q9CQV4 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Retreg3Q9CQV4 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Retreg3Q9CQV4 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Retreg3Q9CQV4 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Retreg3Q9CQV4 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retreg3Q9CQV4 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retreg3Q9CQV4 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Retreg3Q9CQV4 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Retreg3Q9CQV4 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retreg3Q9CQV4 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retreg3Q9CQV4 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retreg3Q9CQV4 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retreg3Q9CQV4 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC14.66□□□□□ -0.06
Retreg3Q9CQV4 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Retreg3Q9CQV4 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retreg3Q9CQV4 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Retreg3Q9CQV4 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC14.66□□□□□ -0.06
Retreg3Q9CQV4 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retreg3Q9CQV4 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retreg3Q9CQV4 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retreg3Q9CQV4 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Retreg3Q9CQV4 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC14.66□□□□□ -0.06
Retreg3Q9CQV4 Nudt18-203ENSMUST00000228768 1578 ntBASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms