Protein–RNA interactions for Protein: Q9CQA6

Chchd1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, mousemouse

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chchd1Q9CQA6 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chchd1Q9CQA6 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chchd1Q9CQA6 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC10.94□□□□□ -0.66
Chchd1Q9CQA6 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chchd1Q9CQA6 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC10.94□□□□□ -0.66
Chchd1Q9CQA6 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Chchd1Q9CQA6 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chchd1Q9CQA6 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chchd1Q9CQA6 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chchd1Q9CQA6 Gm9924-202ENSMUST00000192760 2311 ntBASIC10.93□□□□□ -0.66
Chchd1Q9CQA6 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chchd1Q9CQA6 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Chchd1Q9CQA6 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Chchd1Q9CQA6 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC10.93□□□□□ -0.66
Chchd1Q9CQA6 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chchd1Q9CQA6 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chchd1Q9CQA6 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Chchd1Q9CQA6 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chchd1Q9CQA6 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chchd1Q9CQA6 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC10.93□□□□□ -0.66
Chchd1Q9CQA6 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chchd1Q9CQA6 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chchd1Q9CQA6 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chchd1Q9CQA6 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Chchd1Q9CQA6 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC10.93□□□□□ -0.66
Chchd1Q9CQA6 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chchd1Q9CQA6 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chchd1Q9CQA6 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chchd1Q9CQA6 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Chchd1Q9CQA6 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chchd1Q9CQA6 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC10.93□□□□□ -0.66
Chchd1Q9CQA6 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Chchd1Q9CQA6 Gm10052-201ENSMUST00000168019 960 ntBASIC10.93□□□□□ -0.66
Chchd1Q9CQA6 Mir5133-201ENSMUST00000174955 77 ntBASIC10.93□□□□□ -0.66
Chchd1Q9CQA6 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC10.93□□□□□ -0.66
Chchd1Q9CQA6 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC10.93□□□□□ -0.66
Chchd1Q9CQA6 Gm42642-201ENSMUST00000200683 355 ntBASIC10.93□□□□□ -0.66
Chchd1Q9CQA6 Gm44430-201ENSMUST00000203376 995 ntBASIC10.93□□□□□ -0.66
Chchd1Q9CQA6 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chchd1Q9CQA6 AC154595.3-201ENSMUST00000224579 384 ntBASIC10.93□□□□□ -0.66
Chchd1Q9CQA6 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chchd1Q9CQA6 AC155729.1-201ENSMUST00000227758 544 ntBASIC10.93□□□□□ -0.66
Chchd1Q9CQA6 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chchd1Q9CQA6 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chchd1Q9CQA6 Gm7729-201ENSMUST00000050143 801 ntBASIC10.93□□□□□ -0.66
Chchd1Q9CQA6 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chchd1Q9CQA6 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chchd1Q9CQA6 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chchd1Q9CQA6 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chchd1Q9CQA6 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Chchd1Q9CQA6 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC10.93□□□□□ -0.66
Chchd1Q9CQA6 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chchd1Q9CQA6 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC10.93□□□□□ -0.66
Chchd1Q9CQA6 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Chchd1Q9CQA6 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chchd1Q9CQA6 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chchd1Q9CQA6 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Chchd1Q9CQA6 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chchd1Q9CQA6 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chchd1Q9CQA6 Gm27196-201ENSMUST00000184787 2582 ntBASIC10.93□□□□□ -0.66
Chchd1Q9CQA6 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chchd1Q9CQA6 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Chchd1Q9CQA6 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chchd1Q9CQA6 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Chchd1Q9CQA6 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Chchd1Q9CQA6 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chchd1Q9CQA6 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Chchd1Q9CQA6 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Chchd1Q9CQA6 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Chchd1Q9CQA6 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Chchd1Q9CQA6 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC10.92□□□□□ -0.66
Chchd1Q9CQA6 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC10.92□□□□□ -0.66
Chchd1Q9CQA6 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Chchd1Q9CQA6 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Chchd1Q9CQA6 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Chchd1Q9CQA6 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Chchd1Q9CQA6 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Chchd1Q9CQA6 AC238940.1-201ENSMUST00000225106 1858 ntBASIC10.92□□□□□ -0.66
Chchd1Q9CQA6 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Chchd1Q9CQA6 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC10.92□□□□□ -0.66
Chchd1Q9CQA6 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Chchd1Q9CQA6 Gm18666-201ENSMUST00000190039 958 ntBASIC10.92□□□□□ -0.66
Chchd1Q9CQA6 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC10.92□□□□□ -0.66
Chchd1Q9CQA6 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Chchd1Q9CQA6 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC10.92□□□□□ -0.66
Chchd1Q9CQA6 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Chchd1Q9CQA6 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Chchd1Q9CQA6 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Chchd1Q9CQA6 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Chchd1Q9CQA6 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC10.92□□□□□ -0.66
Chchd1Q9CQA6 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Chchd1Q9CQA6 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Chchd1Q9CQA6 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Chchd1Q9CQA6 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Chchd1Q9CQA6 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC10.92□□□□□ -0.66
Chchd1Q9CQA6 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Chchd1Q9CQA6 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Chchd1Q9CQA6 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Chchd1Q9CQA6 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Chchd1Q9CQA6 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms