Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim33Q99PP7 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim33Q99PP7 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim33Q99PP7 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim33Q99PP7 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim33Q99PP7 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim33Q99PP7 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Trim33Q99PP7 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim33Q99PP7 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC14.41□□□□□ -0.1
Trim33Q99PP7 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim33Q99PP7 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC14.41□□□□□ -0.1
Trim33Q99PP7 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC14.41□□□□□ -0.1
Trim33Q99PP7 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim33Q99PP7 Gm20553-201ENSMUST00000204205 844 ntBASIC14.41□□□□□ -0.1
Trim33Q99PP7 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
Trim33Q99PP7 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim33Q99PP7 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Trim33Q99PP7 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Trim33Q99PP7 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim33Q99PP7 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim33Q99PP7 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim33Q99PP7 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim33Q99PP7 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim33Q99PP7 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim33Q99PP7 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim33Q99PP7 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Trim33Q99PP7 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim33Q99PP7 2810454H06Rik-201ENSMUST00000189942 3148 ntBASIC14.41□□□□□ -0.1
Trim33Q99PP7 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim33Q99PP7 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim33Q99PP7 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trim33Q99PP7 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim33Q99PP7 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim33Q99PP7 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim33Q99PP7 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC14.41□□□□□ -0.1
Trim33Q99PP7 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim33Q99PP7 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim33Q99PP7 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim33Q99PP7 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim33Q99PP7 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim33Q99PP7 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim33Q99PP7 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim33Q99PP7 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim33Q99PP7 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim33Q99PP7 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim33Q99PP7 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim33Q99PP7 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Trim33Q99PP7 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC14.4□□□□□ -0.1
Trim33Q99PP7 Gm11025-201ENSMUST00000140773 466 ntBASIC14.4□□□□□ -0.1
Trim33Q99PP7 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC14.4□□□□□ -0.1
Trim33Q99PP7 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim33Q99PP7 Gm45612-201ENSMUST00000211320 160 ntBASIC14.4□□□□□ -0.1
Trim33Q99PP7 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim33Q99PP7 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim33Q99PP7 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trim33Q99PP7 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim33Q99PP7 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim33Q99PP7 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim33Q99PP7 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Trim33Q99PP7 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim33Q99PP7 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim33Q99PP7 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim33Q99PP7 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC14.4□□□□□ -0.1
Trim33Q99PP7 Gm37728-201ENSMUST00000195025 2292 ntBASIC14.4□□□□□ -0.1
Trim33Q99PP7 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim33Q99PP7 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim33Q99PP7 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC14.4□□□□□ -0.1
Trim33Q99PP7 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Trim33Q99PP7 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Trim33Q99PP7 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim33Q99PP7 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trim33Q99PP7 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Trim33Q99PP7 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim33Q99PP7 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trim33Q99PP7 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim33Q99PP7 Gm5357-201ENSMUST00000212720 1924 ntBASIC14.39□□□□□ -0.11
Trim33Q99PP7 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trim33Q99PP7 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim33Q99PP7 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Trim33Q99PP7 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim33Q99PP7 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim33Q99PP7 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim33Q99PP7 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC14.39□□□□□ -0.11
Trim33Q99PP7 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim33Q99PP7 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC14.39□□□□□ -0.11
Trim33Q99PP7 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC14.39□□□□□ -0.11
Trim33Q99PP7 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim33Q99PP7 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trim33Q99PP7 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC14.39□□□□□ -0.11
Trim33Q99PP7 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim33Q99PP7 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trim33Q99PP7 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim33Q99PP7 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim33Q99PP7 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trim33Q99PP7 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim33Q99PP7 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim33Q99PP7 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim33Q99PP7 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim33Q99PP7 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.39□□□□□ -0.11
Trim33Q99PP7 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms