Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim8Q99PJ2 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim8Q99PJ2 Gm45546-201ENSMUST00000211053 2394 ntBASIC14.24□□□□□ -0.13
Trim8Q99PJ2 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim8Q99PJ2 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim8Q99PJ2 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trim8Q99PJ2 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trim8Q99PJ2 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim8Q99PJ2 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim8Q99PJ2 Gm13884-201ENSMUST00000118103 829 ntBASIC14.24□□□□□ -0.13
Trim8Q99PJ2 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trim8Q99PJ2 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC14.24□□□□□ -0.13
Trim8Q99PJ2 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim8Q99PJ2 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC14.24□□□□□ -0.13
Trim8Q99PJ2 Gm45167-201ENSMUST00000208007 322 ntBASIC14.24□□□□□ -0.13
Trim8Q99PJ2 AC164629.2-201ENSMUST00000217916 270 ntBASIC14.24□□□□□ -0.13
Trim8Q99PJ2 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Trim8Q99PJ2 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim8Q99PJ2 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Trim8Q99PJ2 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Trim8Q99PJ2 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim8Q99PJ2 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim8Q99PJ2 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trim8Q99PJ2 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trim8Q99PJ2 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim8Q99PJ2 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC14.24□□□□□ -0.13
Trim8Q99PJ2 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trim8Q99PJ2 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim8Q99PJ2 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim8Q99PJ2 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Trim8Q99PJ2 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Trim8Q99PJ2 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trim8Q99PJ2 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim8Q99PJ2 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim8Q99PJ2 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim8Q99PJ2 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim8Q99PJ2 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim8Q99PJ2 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trim8Q99PJ2 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim8Q99PJ2 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim8Q99PJ2 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim8Q99PJ2 Gm30238-201ENSMUST00000195528 2603 ntBASIC14.23□□□□□ -0.13
Trim8Q99PJ2 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim8Q99PJ2 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trim8Q99PJ2 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim8Q99PJ2 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim8Q99PJ2 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC14.23□□□□□ -0.13
Trim8Q99PJ2 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC14.23□□□□□ -0.13
Trim8Q99PJ2 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Trim8Q99PJ2 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
Trim8Q99PJ2 Gm43935-201ENSMUST00000203569 1050 ntBASIC14.23□□□□□ -0.13
Trim8Q99PJ2 Gm18246-201ENSMUST00000221023 728 ntBASIC14.23□□□□□ -0.13
Trim8Q99PJ2 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC14.23□□□□□ -0.13
Trim8Q99PJ2 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Trim8Q99PJ2 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim8Q99PJ2 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim8Q99PJ2 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trim8Q99PJ2 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Trim8Q99PJ2 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim8Q99PJ2 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Trim8Q99PJ2 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim8Q99PJ2 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim8Q99PJ2 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Trim8Q99PJ2 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim8Q99PJ2 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim8Q99PJ2 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim8Q99PJ2 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14.23□□□□□ -0.13
Trim8Q99PJ2 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim8Q99PJ2 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC14.23□□□□□ -0.13
Trim8Q99PJ2 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim8Q99PJ2 Best4-ps-201ENSMUST00000129783 1380 ntBASIC14.22□□□□□ -0.13
Trim8Q99PJ2 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC14.22□□□□□ -0.13
Trim8Q99PJ2 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Trim8Q99PJ2 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim8Q99PJ2 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trim8Q99PJ2 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim8Q99PJ2 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trim8Q99PJ2 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim8Q99PJ2 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim8Q99PJ2 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Trim8Q99PJ2 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim8Q99PJ2 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC14.22□□□□□ -0.13
Trim8Q99PJ2 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim8Q99PJ2 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim8Q99PJ2 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trim8Q99PJ2 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Trim8Q99PJ2 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
Trim8Q99PJ2 Gm15173-201ENSMUST00000122049 433 ntBASIC14.22□□□□□ -0.13
Trim8Q99PJ2 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim8Q99PJ2 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC14.22□□□□□ -0.13
Trim8Q99PJ2 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC14.22□□□□□ -0.13
Trim8Q99PJ2 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Trim8Q99PJ2 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC14.22□□□□□ -0.13
Trim8Q99PJ2 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim8Q99PJ2 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim8Q99PJ2 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim8Q99PJ2 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC14.22□□□□□ -0.13
Trim8Q99PJ2 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim8Q99PJ2 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim8Q99PJ2 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms