Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdh15Q99PJ1 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdh15Q99PJ1 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdh15Q99PJ1 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdh15Q99PJ1 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdh15Q99PJ1 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Pcdh15Q99PJ1 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC16.09■□□□□ 0.17
Pcdh15Q99PJ1 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdh15Q99PJ1 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdh15Q99PJ1 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdh15Q99PJ1 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdh15Q99PJ1 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdh15Q99PJ1 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdh15Q99PJ1 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdh15Q99PJ1 Gm12241-201ENSMUST00000118330 726 ntBASIC16.08■□□□□ 0.16
Pcdh15Q99PJ1 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC16.08■□□□□ 0.16
Pcdh15Q99PJ1 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC16.08■□□□□ 0.16
Pcdh15Q99PJ1 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdh15Q99PJ1 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdh15Q99PJ1 Tyms-ps-201ENSMUST00000219550 915 ntBASIC16.08■□□□□ 0.16
Pcdh15Q99PJ1 Gm42901-201ENSMUST00000197735 3171 ntBASIC16.08■□□□□ 0.16
Pcdh15Q99PJ1 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdh15Q99PJ1 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdh15Q99PJ1 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdh15Q99PJ1 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdh15Q99PJ1 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Pcdh15Q99PJ1 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC16.08■□□□□ 0.16
Pcdh15Q99PJ1 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdh15Q99PJ1 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdh15Q99PJ1 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdh15Q99PJ1 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdh15Q99PJ1 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC16.08■□□□□ 0.16
Pcdh15Q99PJ1 Mir877-201ENSMUST00000104738 85 ntBASIC16.07■□□□□ 0.16
Pcdh15Q99PJ1 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdh15Q99PJ1 Gm38158-201ENSMUST00000194617 339 ntBASIC16.07■□□□□ 0.16
Pcdh15Q99PJ1 Gm42627-201ENSMUST00000197347 224 ntBASIC16.07■□□□□ 0.16
Pcdh15Q99PJ1 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC16.07■□□□□ 0.16
Pcdh15Q99PJ1 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdh15Q99PJ1 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Pcdh15Q99PJ1 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdh15Q99PJ1 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdh15Q99PJ1 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.07■□□□□ 0.16
Pcdh15Q99PJ1 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Pcdh15Q99PJ1 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdh15Q99PJ1 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdh15Q99PJ1 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdh15Q99PJ1 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdh15Q99PJ1 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Pcdh15Q99PJ1 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdh15Q99PJ1 Gm2991-201ENSMUST00000173338 480 ntBASIC16.07■□□□□ 0.16
Pcdh15Q99PJ1 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC16.07■□□□□ 0.16
Pcdh15Q99PJ1 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdh15Q99PJ1 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdh15Q99PJ1 Gm44616-201ENSMUST00000206417 1732 ntBASIC16.07■□□□□ 0.16
Pcdh15Q99PJ1 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdh15Q99PJ1 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdh15Q99PJ1 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdh15Q99PJ1 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdh15Q99PJ1 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdh15Q99PJ1 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdh15Q99PJ1 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Pcdh15Q99PJ1 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdh15Q99PJ1 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
Pcdh15Q99PJ1 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdh15Q99PJ1 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
Pcdh15Q99PJ1 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC16.06■□□□□ 0.16
Pcdh15Q99PJ1 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdh15Q99PJ1 AC154462.2-201ENSMUST00000227519 370 ntBASIC16.06■□□□□ 0.16
Pcdh15Q99PJ1 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdh15Q99PJ1 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdh15Q99PJ1 AC115735.4-201ENSMUST00000227460 1944 ntBASIC16.06■□□□□ 0.16
Pcdh15Q99PJ1 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdh15Q99PJ1 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC16.06■□□□□ 0.16
Pcdh15Q99PJ1 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdh15Q99PJ1 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdh15Q99PJ1 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC16.06■□□□□ 0.16
Pcdh15Q99PJ1 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC16.06■□□□□ 0.16
Pcdh15Q99PJ1 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Pcdh15Q99PJ1 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdh15Q99PJ1 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdh15Q99PJ1 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdh15Q99PJ1 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdh15Q99PJ1 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdh15Q99PJ1 Gm44207-201ENSMUST00000204568 1424 ntBASIC16.05■□□□□ 0.16
Pcdh15Q99PJ1 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdh15Q99PJ1 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdh15Q99PJ1 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdh15Q99PJ1 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Pcdh15Q99PJ1 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdh15Q99PJ1 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdh15Q99PJ1 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdh15Q99PJ1 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdh15Q99PJ1 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdh15Q99PJ1 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Pcdh15Q99PJ1 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdh15Q99PJ1 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Pcdh15Q99PJ1 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdh15Q99PJ1 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdh15Q99PJ1 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdh15Q99PJ1 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms